Protein–RNA interactions for Protein: Q9QXA7

Trim44, Tripartite motif-containing protein 44, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim44Q9QXA7 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.15■□□□□ 0.5
Trim44Q9QXA7 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC18.15■□□□□ 0.5
Trim44Q9QXA7 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim44Q9QXA7 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trim44Q9QXA7 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim44Q9QXA7 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC18.15■□□□□ 0.5
Trim44Q9QXA7 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.15■□□□□ 0.5
Trim44Q9QXA7 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim44Q9QXA7 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim44Q9QXA7 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim44Q9QXA7 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim44Q9QXA7 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim44Q9QXA7 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim44Q9QXA7 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Trim44Q9QXA7 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim44Q9QXA7 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Trim44Q9QXA7 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Trim44Q9QXA7 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim44Q9QXA7 Gm5408-201ENSMUST00000197998 747 ntBASIC18.14■□□□□ 0.49
Trim44Q9QXA7 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Trim44Q9QXA7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim44Q9QXA7 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trim44Q9QXA7 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trim44Q9QXA7 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim44Q9QXA7 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim44Q9QXA7 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim44Q9QXA7 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim44Q9QXA7 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC18.14■□□□□ 0.49
Trim44Q9QXA7 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim44Q9QXA7 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim44Q9QXA7 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim44Q9QXA7 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim44Q9QXA7 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim44Q9QXA7 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim44Q9QXA7 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim44Q9QXA7 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim44Q9QXA7 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim44Q9QXA7 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim44Q9QXA7 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim44Q9QXA7 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim44Q9QXA7 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim44Q9QXA7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim44Q9QXA7 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim44Q9QXA7 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.13■□□□□ 0.49
Trim44Q9QXA7 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Trim44Q9QXA7 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim44Q9QXA7 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim44Q9QXA7 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim44Q9QXA7 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim44Q9QXA7 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim44Q9QXA7 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim44Q9QXA7 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim44Q9QXA7 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Trim44Q9QXA7 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim44Q9QXA7 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim44Q9QXA7 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim44Q9QXA7 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim44Q9QXA7 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim44Q9QXA7 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim44Q9QXA7 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trim44Q9QXA7 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim44Q9QXA7 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim44Q9QXA7 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trim44Q9QXA7 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim44Q9QXA7 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trim44Q9QXA7 Gm27000-201ENSMUST00000182943 842 ntBASIC18.12■□□□□ 0.49
Trim44Q9QXA7 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trim44Q9QXA7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trim44Q9QXA7 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim44Q9QXA7 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Trim44Q9QXA7 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC18.12■□□□□ 0.49
Trim44Q9QXA7 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim44Q9QXA7 Gm43399-201ENSMUST00000202546 2374 ntBASIC18.12■□□□□ 0.49
Trim44Q9QXA7 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.12■□□□□ 0.49
Trim44Q9QXA7 Gm38577-201ENSMUST00000221531 4545 ntBASIC18.12■□□□□ 0.49
Trim44Q9QXA7 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trim44Q9QXA7 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
Trim44Q9QXA7 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim44Q9QXA7 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim44Q9QXA7 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim44Q9QXA7 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.12■□□□□ 0.49
Trim44Q9QXA7 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.12■□□□□ 0.49
Trim44Q9QXA7 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trim44Q9QXA7 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim44Q9QXA7 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.11■□□□□ 0.49
Trim44Q9QXA7 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim44Q9QXA7 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim44Q9QXA7 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim44Q9QXA7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.11■□□□□ 0.49
Trim44Q9QXA7 Gm27405-201ENSMUST00000184201 112 ntBASIC18.11■□□□□ 0.49
Trim44Q9QXA7 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.11■□□□□ 0.49
Trim44Q9QXA7 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim44Q9QXA7 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim44Q9QXA7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim44Q9QXA7 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim44Q9QXA7 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim44Q9QXA7 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim44Q9QXA7 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim44Q9QXA7 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.11■□□□□ 0.49
Trim44Q9QXA7 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms