Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scn5aQ9JJV9 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.05■□□□□ 0.16
Scn5aQ9JJV9 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scn5aQ9JJV9 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scn5aQ9JJV9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Scn5aQ9JJV9 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scn5aQ9JJV9 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Scn5aQ9JJV9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Scn5aQ9JJV9 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.05■□□□□ 0.16
Scn5aQ9JJV9 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scn5aQ9JJV9 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Scn5aQ9JJV9 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scn5aQ9JJV9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Scn5aQ9JJV9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Scn5aQ9JJV9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Scn5aQ9JJV9 Gm6973-201ENSMUST00000117080 721 ntBASIC16.04■□□□□ 0.16
Scn5aQ9JJV9 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.04■□□□□ 0.16
Scn5aQ9JJV9 Gm22175-201ENSMUST00000175007 78 ntBASIC16.04■□□□□ 0.16
Scn5aQ9JJV9 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Scn5aQ9JJV9 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.04■□□□□ 0.16
Scn5aQ9JJV9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn5aQ9JJV9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn5aQ9JJV9 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn5aQ9JJV9 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.04■□□□□ 0.16
Scn5aQ9JJV9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn5aQ9JJV9 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn5aQ9JJV9 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn5aQ9JJV9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn5aQ9JJV9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Scn5aQ9JJV9 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn5aQ9JJV9 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn5aQ9JJV9 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn5aQ9JJV9 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Scn5aQ9JJV9 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.04■□□□□ 0.16
Scn5aQ9JJV9 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Scn5aQ9JJV9 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.04■□□□□ 0.16
Scn5aQ9JJV9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn5aQ9JJV9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn5aQ9JJV9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.04■□□□□ 0.16
Scn5aQ9JJV9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn5aQ9JJV9 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn5aQ9JJV9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn5aQ9JJV9 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Scn5aQ9JJV9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn5aQ9JJV9 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Scn5aQ9JJV9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn5aQ9JJV9 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn5aQ9JJV9 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.03■□□□□ 0.16
Scn5aQ9JJV9 Gm25287-201ENSMUST00000103846 110 ntBASIC16.03■□□□□ 0.16
Scn5aQ9JJV9 Gm22918-201ENSMUST00000103855 110 ntBASIC16.03■□□□□ 0.16
Scn5aQ9JJV9 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Scn5aQ9JJV9 Gm11424-201ENSMUST00000121929 829 ntBASIC16.03■□□□□ 0.16
Scn5aQ9JJV9 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Scn5aQ9JJV9 Gm5186-201ENSMUST00000218781 920 ntBASIC16.03■□□□□ 0.16
Scn5aQ9JJV9 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn5aQ9JJV9 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn5aQ9JJV9 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.03■□□□□ 0.16
Scn5aQ9JJV9 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn5aQ9JJV9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn5aQ9JJV9 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Scn5aQ9JJV9 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn5aQ9JJV9 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.03■□□□□ 0.16
Scn5aQ9JJV9 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.03■□□□□ 0.16
Scn5aQ9JJV9 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn5aQ9JJV9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn5aQ9JJV9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.02■□□□□ 0.16
Scn5aQ9JJV9 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Scn5aQ9JJV9 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Scn5aQ9JJV9 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.02■□□□□ 0.16
Scn5aQ9JJV9 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Scn5aQ9JJV9 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Scn5aQ9JJV9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn5aQ9JJV9 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn5aQ9JJV9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn5aQ9JJV9 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn5aQ9JJV9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn5aQ9JJV9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn5aQ9JJV9 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn5aQ9JJV9 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Scn5aQ9JJV9 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Scn5aQ9JJV9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.02■□□□□ 0.15
Scn5aQ9JJV9 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Scn5aQ9JJV9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Scn5aQ9JJV9 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.02■□□□□ 0.15
Scn5aQ9JJV9 Gm2272-201ENSMUST00000194903 582 ntBASIC16.02■□□□□ 0.15
Scn5aQ9JJV9 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.02■□□□□ 0.15
Scn5aQ9JJV9 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.02■□□□□ 0.15
Scn5aQ9JJV9 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.02■□□□□ 0.15
Scn5aQ9JJV9 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Scn5aQ9JJV9 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Scn5aQ9JJV9 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.02■□□□□ 0.15
Scn5aQ9JJV9 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Scn5aQ9JJV9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Scn5aQ9JJV9 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Scn5aQ9JJV9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Scn5aQ9JJV9 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.01■□□□□ 0.15
Scn5aQ9JJV9 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn5aQ9JJV9 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.01■□□□□ 0.15
Scn5aQ9JJV9 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.01■□□□□ 0.15
Scn5aQ9JJV9 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms