Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNTNAP3Q9BZ76 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.6■□□□□ 0.41
CNTNAP3Q9BZ76 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNTNAP3Q9BZ76 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNTNAP3Q9BZ76 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CNTNAP3Q9BZ76 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CNTNAP3Q9BZ76 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNTNAP3Q9BZ76 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CNTNAP3Q9BZ76 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
CNTNAP3Q9BZ76 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CNTNAP3Q9BZ76 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CNTNAP3Q9BZ76 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.6■□□□□ 0.41
CNTNAP3Q9BZ76 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
CNTNAP3Q9BZ76 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.6■□□□□ 0.41
CNTNAP3Q9BZ76 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNTNAP3Q9BZ76 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CNTNAP3Q9BZ76 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.6■□□□□ 0.41
CNTNAP3Q9BZ76 AC011840.4-201ENST00000578471 627 ntBASIC17.6■□□□□ 0.41
CNTNAP3Q9BZ76 AL606495.2-201ENST00000605867 535 ntBASIC17.6■□□□□ 0.41
CNTNAP3Q9BZ76 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.6■□□□□ 0.41
CNTNAP3Q9BZ76 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.6■□□□□ 0.41
CNTNAP3Q9BZ76 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CNTNAP3Q9BZ76 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNTNAP3Q9BZ76 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CNTNAP3Q9BZ76 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
CNTNAP3Q9BZ76 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.6■□□□□ 0.41
CNTNAP3Q9BZ76 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.6■□□□□ 0.41
CNTNAP3Q9BZ76 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNTNAP3Q9BZ76 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.6■□□□□ 0.41
CNTNAP3Q9BZ76 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CNTNAP3Q9BZ76 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNTNAP3Q9BZ76 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNTNAP3Q9BZ76 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CNTNAP3Q9BZ76 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNTNAP3Q9BZ76 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CNTNAP3Q9BZ76 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CNTNAP3Q9BZ76 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNTNAP3Q9BZ76 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNTNAP3Q9BZ76 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNTNAP3Q9BZ76 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNTNAP3Q9BZ76 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.59■□□□□ 0.41
CNTNAP3Q9BZ76 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.59■□□□□ 0.41
CNTNAP3Q9BZ76 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNTNAP3Q9BZ76 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.59■□□□□ 0.41
CNTNAP3Q9BZ76 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.59■□□□□ 0.41
CNTNAP3Q9BZ76 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CNTNAP3Q9BZ76 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CNTNAP3Q9BZ76 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
CNTNAP3Q9BZ76 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.59■□□□□ 0.41
CNTNAP3Q9BZ76 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.59■□□□□ 0.41
CNTNAP3Q9BZ76 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.59■□□□□ 0.41
CNTNAP3Q9BZ76 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.59■□□□□ 0.41
CNTNAP3Q9BZ76 AC005225.4-201ENST00000557330 545 ntBASIC17.59■□□□□ 0.41
CNTNAP3Q9BZ76 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.59■□□□□ 0.41
CNTNAP3Q9BZ76 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.59■□□□□ 0.41
CNTNAP3Q9BZ76 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.59■□□□□ 0.41
CNTNAP3Q9BZ76 AC093512.1-201ENST00000617969 520 ntBASIC17.59■□□□□ 0.41
CNTNAP3Q9BZ76 AC114341.1-201ENST00000618070 349 ntBASIC17.59■□□□□ 0.41
CNTNAP3Q9BZ76 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CNTNAP3Q9BZ76 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNTNAP3Q9BZ76 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNTNAP3Q9BZ76 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNTNAP3Q9BZ76 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.59■□□□□ 0.41
CNTNAP3Q9BZ76 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.59■□□□□ 0.41
CNTNAP3Q9BZ76 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CNTNAP3Q9BZ76 GPAT2P1-201ENST00000444924 1672 ntBASIC17.58■□□□□ 0.41
CNTNAP3Q9BZ76 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CNTNAP3Q9BZ76 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CNTNAP3Q9BZ76 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CNTNAP3Q9BZ76 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.58■□□□□ 0.4
CNTNAP3Q9BZ76 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CNTNAP3Q9BZ76 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CNTNAP3Q9BZ76 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CNTNAP3Q9BZ76 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.58■□□□□ 0.4
CNTNAP3Q9BZ76 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.58■□□□□ 0.4
CNTNAP3Q9BZ76 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CNTNAP3Q9BZ76 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.58■□□□□ 0.4
CNTNAP3Q9BZ76 ALG1L5P-201ENST00000482043 771 ntBASIC17.58■□□□□ 0.4
CNTNAP3Q9BZ76 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.58■□□□□ 0.4
CNTNAP3Q9BZ76 UNC93B6-202ENST00000528242 690 ntBASIC17.58■□□□□ 0.4
CNTNAP3Q9BZ76 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.58■□□□□ 0.4
CNTNAP3Q9BZ76 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CNTNAP3Q9BZ76 AC021087.4-201ENST00000563761 564 ntBASIC17.58■□□□□ 0.4
CNTNAP3Q9BZ76 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.58■□□□□ 0.4
CNTNAP3Q9BZ76 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CNTNAP3Q9BZ76 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.58■□□□□ 0.4
CNTNAP3Q9BZ76 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNTNAP3Q9BZ76 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNTNAP3Q9BZ76 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNTNAP3Q9BZ76 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNTNAP3Q9BZ76 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNTNAP3Q9BZ76 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNTNAP3Q9BZ76 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.57■□□□□ 0.4
CNTNAP3Q9BZ76 AC138932.1-201ENST00000534164 6830 ntBASIC17.57■□□□□ 0.4
CNTNAP3Q9BZ76 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNTNAP3Q9BZ76 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNTNAP3Q9BZ76 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNTNAP3Q9BZ76 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNTNAP3Q9BZ76 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNTNAP3Q9BZ76 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms