Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Dancr-204ENSMUST00000132389 2347 ntBASIC15.45■□□□□ 0.06
Pcdhga9Q91XX9 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga9Q91XX9 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Pcdhga9Q91XX9 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga9Q91XX9 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga9Q91XX9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.45■□□□□ 0.06
Pcdhga9Q91XX9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Pcdhga9Q91XX9 Gm18206-201ENSMUST00000207027 926 ntBASIC15.45■□□□□ 0.06
Pcdhga9Q91XX9 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.45■□□□□ 0.06
Pcdhga9Q91XX9 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.45■□□□□ 0.06
Pcdhga9Q91XX9 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga9Q91XX9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga9Q91XX9 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga9Q91XX9 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga9Q91XX9 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.45■□□□□ 0.06
Pcdhga9Q91XX9 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga9Q91XX9 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga9Q91XX9 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Pcdhga9Q91XX9 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga9Q91XX9 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga9Q91XX9 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga9Q91XX9 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga9Q91XX9 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga9Q91XX9 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhga9Q91XX9 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga9Q91XX9 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga9Q91XX9 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga9Q91XX9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Pcdhga9Q91XX9 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga9Q91XX9 Gm18622-201ENSMUST00000219361 595 ntBASIC15.44■□□□□ 0.06
Pcdhga9Q91XX9 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.44■□□□□ 0.06
Pcdhga9Q91XX9 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.44■□□□□ 0.06
Pcdhga9Q91XX9 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.44■□□□□ 0.06
Pcdhga9Q91XX9 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga9Q91XX9 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga9Q91XX9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Pcdhga9Q91XX9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga9Q91XX9 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhga9Q91XX9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga9Q91XX9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhga9Q91XX9 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdhga9Q91XX9 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdhga9Q91XX9 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga9Q91XX9 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdhga9Q91XX9 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhga9Q91XX9 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Pcdhga9Q91XX9 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga9Q91XX9 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.43■□□□□ 0.06
Pcdhga9Q91XX9 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Pcdhga9Q91XX9 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga9Q91XX9 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga9Q91XX9 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga9Q91XX9 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga9Q91XX9 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga9Q91XX9 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga9Q91XX9 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga9Q91XX9 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.43■□□□□ 0.06
Pcdhga9Q91XX9 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga9Q91XX9 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga9Q91XX9 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga9Q91XX9 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.43■□□□□ 0.06
Pcdhga9Q91XX9 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga9Q91XX9 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga9Q91XX9 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga9Q91XX9 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga9Q91XX9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga9Q91XX9 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga9Q91XX9 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga9Q91XX9 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Pcdhga9Q91XX9 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Pcdhga9Q91XX9 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga9Q91XX9 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga9Q91XX9 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga9Q91XX9 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga9Q91XX9 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Pcdhga9Q91XX9 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Pcdhga9Q91XX9 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.42■□□□□ 0.06
Pcdhga9Q91XX9 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga9Q91XX9 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga9Q91XX9 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga9Q91XX9 Prob1-201ENSMUST00000097619 3021 ntBASIC15.42■□□□□ 0.06
Pcdhga9Q91XX9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga9Q91XX9 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga9Q91XX9 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Pcdhga9Q91XX9 Mir5131-201ENSMUST00000175426 93 ntBASIC15.42■□□□□ 0.06
Pcdhga9Q91XX9 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga9Q91XX9 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Pcdhga9Q91XX9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga9Q91XX9 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga9Q91XX9 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga9Q91XX9 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.42■□□□□ 0.06
Pcdhga9Q91XX9 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga9Q91XX9 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga9Q91XX9 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.42■□□□□ 0.06
Pcdhga9Q91XX9 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga9Q91XX9 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.42■□□□□ 0.06
Pcdhga9Q91XX9 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga9Q91XX9 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga9Q91XX9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga9Q91XX9 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms