Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
Ddx39aQ8VDW0 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx39aQ8VDW0 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Ddx39aQ8VDW0 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.33■□□□□ 0.36
Ddx39aQ8VDW0 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC17.33■□□□□ 0.36
Ddx39aQ8VDW0 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.33■□□□□ 0.36
Ddx39aQ8VDW0 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx39aQ8VDW0 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx39aQ8VDW0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx39aQ8VDW0 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx39aQ8VDW0 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx39aQ8VDW0 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Ddx39aQ8VDW0 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx39aQ8VDW0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ddx39aQ8VDW0 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx39aQ8VDW0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx39aQ8VDW0 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx39aQ8VDW0 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx39aQ8VDW0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx39aQ8VDW0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx39aQ8VDW0 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Ddx39aQ8VDW0 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ddx39aQ8VDW0 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Ddx39aQ8VDW0 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.32■□□□□ 0.36
Ddx39aQ8VDW0 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx39aQ8VDW0 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx39aQ8VDW0 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.32■□□□□ 0.36
Ddx39aQ8VDW0 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx39aQ8VDW0 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx39aQ8VDW0 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx39aQ8VDW0 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx39aQ8VDW0 Gm10175-201ENSMUST00000086013 645 ntBASIC17.32■□□□□ 0.36
Ddx39aQ8VDW0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx39aQ8VDW0 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx39aQ8VDW0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx39aQ8VDW0 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Ddx39aQ8VDW0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx39aQ8VDW0 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx39aQ8VDW0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx39aQ8VDW0 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx39aQ8VDW0 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx39aQ8VDW0 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx39aQ8VDW0 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.31■□□□□ 0.36
Ddx39aQ8VDW0 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ddx39aQ8VDW0 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx39aQ8VDW0 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx39aQ8VDW0 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.31■□□□□ 0.36
Ddx39aQ8VDW0 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx39aQ8VDW0 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx39aQ8VDW0 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx39aQ8VDW0 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Ddx39aQ8VDW0 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx39aQ8VDW0 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx39aQ8VDW0 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx39aQ8VDW0 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC17.31■□□□□ 0.36
Ddx39aQ8VDW0 Gm25911-201ENSMUST00000157621 56 ntBASIC17.31■□□□□ 0.36
Ddx39aQ8VDW0 Gm18489-201ENSMUST00000172565 551 ntBASIC17.31■□□□□ 0.36
Ddx39aQ8VDW0 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.31■□□□□ 0.36
Ddx39aQ8VDW0 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.31■□□□□ 0.36
Ddx39aQ8VDW0 Gm2756-201ENSMUST00000195851 400 ntBASIC17.31■□□□□ 0.36
Ddx39aQ8VDW0 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx39aQ8VDW0 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx39aQ8VDW0 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ddx39aQ8VDW0 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ddx39aQ8VDW0 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ddx39aQ8VDW0 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx39aQ8VDW0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ddx39aQ8VDW0 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx39aQ8VDW0 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx39aQ8VDW0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx39aQ8VDW0 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ddx39aQ8VDW0 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx39aQ8VDW0 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx39aQ8VDW0 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Ddx39aQ8VDW0 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx39aQ8VDW0 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx39aQ8VDW0 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx39aQ8VDW0 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx39aQ8VDW0 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx39aQ8VDW0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx39aQ8VDW0 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx39aQ8VDW0 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx39aQ8VDW0 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Ddx39aQ8VDW0 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Ddx39aQ8VDW0 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.3■□□□□ 0.36
Ddx39aQ8VDW0 Mir8117-201ENSMUST00000184773 107 ntBASIC17.3■□□□□ 0.36
Ddx39aQ8VDW0 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx39aQ8VDW0 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.3■□□□□ 0.36
Ddx39aQ8VDW0 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx39aQ8VDW0 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx39aQ8VDW0 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx39aQ8VDW0 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx39aQ8VDW0 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.3■□□□□ 0.36
Ddx39aQ8VDW0 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx39aQ8VDW0 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx39aQ8VDW0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx39aQ8VDW0 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx39aQ8VDW0 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Ddx39aQ8VDW0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx39aQ8VDW0 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms