Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.75□□□□□ -0.05
Ndc1Q8VCB1 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.75□□□□□ -0.05
Ndc1Q8VCB1 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ndc1Q8VCB1 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.75□□□□□ -0.05
Ndc1Q8VCB1 Gm18622-201ENSMUST00000219361 595 ntBASIC14.75□□□□□ -0.05
Ndc1Q8VCB1 AV026068-213ENSMUST00000223675 1171 ntBASIC14.75□□□□□ -0.05
Ndc1Q8VCB1 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ndc1Q8VCB1 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Ndc1Q8VCB1 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Ndc1Q8VCB1 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ndc1Q8VCB1 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ndc1Q8VCB1 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ndc1Q8VCB1 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ndc1Q8VCB1 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ndc1Q8VCB1 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ndc1Q8VCB1 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ndc1Q8VCB1 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ndc1Q8VCB1 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ndc1Q8VCB1 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ndc1Q8VCB1 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ndc1Q8VCB1 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Ndc1Q8VCB1 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ndc1Q8VCB1 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ndc1Q8VCB1 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ndc1Q8VCB1 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ndc1Q8VCB1 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ndc1Q8VCB1 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ndc1Q8VCB1 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ndc1Q8VCB1 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ndc1Q8VCB1 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ndc1Q8VCB1 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ndc1Q8VCB1 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ndc1Q8VCB1 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.74□□□□□ -0.05
Ndc1Q8VCB1 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ndc1Q8VCB1 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ndc1Q8VCB1 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.74□□□□□ -0.05
Ndc1Q8VCB1 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Ndc1Q8VCB1 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.74□□□□□ -0.05
Ndc1Q8VCB1 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.74□□□□□ -0.05
Ndc1Q8VCB1 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.74□□□□□ -0.05
Ndc1Q8VCB1 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ndc1Q8VCB1 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ndc1Q8VCB1 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.74□□□□□ -0.05
Ndc1Q8VCB1 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Ndc1Q8VCB1 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Ndc1Q8VCB1 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ndc1Q8VCB1 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ndc1Q8VCB1 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ndc1Q8VCB1 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ndc1Q8VCB1 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ndc1Q8VCB1 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ndc1Q8VCB1 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ndc1Q8VCB1 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ndc1Q8VCB1 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ndc1Q8VCB1 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Ndc1Q8VCB1 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ndc1Q8VCB1 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Ndc1Q8VCB1 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ndc1Q8VCB1 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.73□□□□□ -0.05
Ndc1Q8VCB1 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Ndc1Q8VCB1 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ndc1Q8VCB1 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.73□□□□□ -0.05
Ndc1Q8VCB1 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ndc1Q8VCB1 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ndc1Q8VCB1 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ndc1Q8VCB1 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ndc1Q8VCB1 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ndc1Q8VCB1 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ndc1Q8VCB1 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ndc1Q8VCB1 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ndc1Q8VCB1 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.73□□□□□ -0.05
Ndc1Q8VCB1 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.73□□□□□ -0.05
Ndc1Q8VCB1 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.73□□□□□ -0.05
Ndc1Q8VCB1 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ndc1Q8VCB1 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Ndc1Q8VCB1 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ndc1Q8VCB1 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ndc1Q8VCB1 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Ndc1Q8VCB1 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Ndc1Q8VCB1 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ndc1Q8VCB1 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ndc1Q8VCB1 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ndc1Q8VCB1 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ndc1Q8VCB1 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ndc1Q8VCB1 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ndc1Q8VCB1 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ndc1Q8VCB1 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ndc1Q8VCB1 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.72□□□□□ -0.05
Ndc1Q8VCB1 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Ndc1Q8VCB1 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ndc1Q8VCB1 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ndc1Q8VCB1 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ndc1Q8VCB1 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ndc1Q8VCB1 Gm7222-201ENSMUST00000117512 906 ntBASIC14.72□□□□□ -0.05
Ndc1Q8VCB1 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ndc1Q8VCB1 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ndc1Q8VCB1 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.72□□□□□ -0.05
Ndc1Q8VCB1 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.72□□□□□ -0.05
Ndc1Q8VCB1 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ndc1Q8VCB1 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms