Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga7Q6DD96 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga7Q6DD96 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga7Q6DD96 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga7Q6DD96 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga7Q6DD96 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga7Q6DD96 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga7Q6DD96 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga7Q6DD96 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.2■□□□□ 0.02
Pcdhga7Q6DD96 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdhga7Q6DD96 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga7Q6DD96 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Pcdhga7Q6DD96 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga7Q6DD96 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga7Q6DD96 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga7Q6DD96 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhga7Q6DD96 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga7Q6DD96 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga7Q6DD96 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga7Q6DD96 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhga7Q6DD96 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga7Q6DD96 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga7Q6DD96 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga7Q6DD96 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga7Q6DD96 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga7Q6DD96 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga7Q6DD96 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga7Q6DD96 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga7Q6DD96 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga7Q6DD96 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga7Q6DD96 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga7Q6DD96 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhga7Q6DD96 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga7Q6DD96 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga7Q6DD96 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga7Q6DD96 Gm11950-201ENSMUST00000121615 838 ntBASIC15.19■□□□□ 0.02
Pcdhga7Q6DD96 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga7Q6DD96 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.19■□□□□ 0.02
Pcdhga7Q6DD96 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Pcdhga7Q6DD96 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhga7Q6DD96 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga7Q6DD96 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga7Q6DD96 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Pcdhga7Q6DD96 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdhga7Q6DD96 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhga7Q6DD96 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga7Q6DD96 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhga7Q6DD96 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga7Q6DD96 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga7Q6DD96 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhga7Q6DD96 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga7Q6DD96 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga7Q6DD96 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdhga7Q6DD96 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdhga7Q6DD96 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga7Q6DD96 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga7Q6DD96 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhga7Q6DD96 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhga7Q6DD96 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga7Q6DD96 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga7Q6DD96 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga7Q6DD96 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdhga7Q6DD96 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga7Q6DD96 Gm6257-201ENSMUST00000163864 910 ntBASIC15.18■□□□□ 0.02
Pcdhga7Q6DD96 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdhga7Q6DD96 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.18■□□□□ 0.02
Pcdhga7Q6DD96 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga7Q6DD96 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga7Q6DD96 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga7Q6DD96 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Pcdhga7Q6DD96 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga7Q6DD96 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga7Q6DD96 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga7Q6DD96 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga7Q6DD96 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga7Q6DD96 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga7Q6DD96 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Pcdhga7Q6DD96 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhga7Q6DD96 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.18■□□□□ 0.02
Pcdhga7Q6DD96 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga7Q6DD96 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga7Q6DD96 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga7Q6DD96 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga7Q6DD96 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga7Q6DD96 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga7Q6DD96 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga7Q6DD96 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga7Q6DD96 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga7Q6DD96 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga7Q6DD96 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga7Q6DD96 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga7Q6DD96 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga7Q6DD96 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga7Q6DD96 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga7Q6DD96 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.17■□□□□ 0.02
Pcdhga7Q6DD96 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga7Q6DD96 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga7Q6DD96 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga7Q6DD96 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga7Q6DD96 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms