Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Notch3Q61982 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Notch3Q61982 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Notch3Q61982 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Notch3Q61982 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Notch3Q61982 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Notch3Q61982 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Notch3Q61982 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Notch3Q61982 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Notch3Q61982 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Notch3Q61982 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.03□□□□□ -0.48
Notch3Q61982 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Notch3Q61982 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Notch3Q61982 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Notch3Q61982 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Notch3Q61982 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Notch3Q61982 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Notch3Q61982 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Notch3Q61982 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Notch3Q61982 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC12.02□□□□□ -0.48
Notch3Q61982 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Notch3Q61982 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Notch3Q61982 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Notch3Q61982 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Notch3Q61982 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Notch3Q61982 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Notch3Q61982 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Notch3Q61982 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Notch3Q61982 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.02□□□□□ -0.49
Notch3Q61982 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Notch3Q61982 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.02□□□□□ -0.49
Notch3Q61982 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Notch3Q61982 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Notch3Q61982 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Notch3Q61982 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Notch3Q61982 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Notch3Q61982 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Notch3Q61982 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Notch3Q61982 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Notch3Q61982 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Notch3Q61982 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Notch3Q61982 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Notch3Q61982 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC12.02□□□□□ -0.49
Notch3Q61982 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Notch3Q61982 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Notch3Q61982 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.02□□□□□ -0.49
Notch3Q61982 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Notch3Q61982 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Notch3Q61982 Gm4459-201ENSMUST00000118750 468 ntBASIC12.02□□□□□ -0.49
Notch3Q61982 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.02□□□□□ -0.49
Notch3Q61982 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.02□□□□□ -0.49
Notch3Q61982 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Notch3Q61982 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Notch3Q61982 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Notch3Q61982 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Notch3Q61982 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Notch3Q61982 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Notch3Q61982 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Notch3Q61982 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
Notch3Q61982 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Notch3Q61982 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Notch3Q61982 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Notch3Q61982 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.01□□□□□ -0.49
Notch3Q61982 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC12.01□□□□□ -0.49
Notch3Q61982 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Notch3Q61982 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Notch3Q61982 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Notch3Q61982 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Notch3Q61982 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Notch3Q61982 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Notch3Q61982 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Notch3Q61982 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Notch3Q61982 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Notch3Q61982 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.01□□□□□ -0.49
Notch3Q61982 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.01□□□□□ -0.49
Notch3Q61982 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Notch3Q61982 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Notch3Q61982 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Notch3Q61982 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Notch3Q61982 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC12.01□□□□□ -0.49
Notch3Q61982 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Notch3Q61982 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Notch3Q61982 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Notch3Q61982 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Notch3Q61982 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Notch3Q61982 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Notch3Q61982 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.01□□□□□ -0.49
Notch3Q61982 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12□□□□□ -0.49
Notch3Q61982 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12□□□□□ -0.49
Notch3Q61982 Mir3113-201ENSMUST00000175478 76 ntBASIC12□□□□□ -0.49
Notch3Q61982 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12□□□□□ -0.49
Notch3Q61982 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12□□□□□ -0.49
Notch3Q61982 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Notch3Q61982 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Notch3Q61982 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Notch3Q61982 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Notch3Q61982 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Notch3Q61982 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Notch3Q61982 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Notch3Q61982 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 231.3 ms