Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LYSMD4Q5XG99 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LYSMD4Q5XG99 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.12■□□□□ 0.49
LYSMD4Q5XG99 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
LYSMD4Q5XG99 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LYSMD4Q5XG99 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
LYSMD4Q5XG99 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LYSMD4Q5XG99 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
LYSMD4Q5XG99 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.12■□□□□ 0.49
LYSMD4Q5XG99 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.12■□□□□ 0.49
LYSMD4Q5XG99 AC139887.3-201ENST00000568585 713 ntBASIC18.12■□□□□ 0.49
LYSMD4Q5XG99 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.12■□□□□ 0.49
LYSMD4Q5XG99 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.12■□□□□ 0.49
LYSMD4Q5XG99 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.12■□□□□ 0.49
LYSMD4Q5XG99 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
LYSMD4Q5XG99 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LYSMD4Q5XG99 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LYSMD4Q5XG99 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LYSMD4Q5XG99 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LYSMD4Q5XG99 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LYSMD4Q5XG99 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LYSMD4Q5XG99 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LYSMD4Q5XG99 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LYSMD4Q5XG99 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.11■□□□□ 0.49
LYSMD4Q5XG99 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.11■□□□□ 0.49
LYSMD4Q5XG99 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.11■□□□□ 0.49
LYSMD4Q5XG99 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LYSMD4Q5XG99 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LYSMD4Q5XG99 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LYSMD4Q5XG99 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
LYSMD4Q5XG99 MIR940-201ENST00000401276 94 ntBASIC18.11■□□□□ 0.49
LYSMD4Q5XG99 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LYSMD4Q5XG99 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.11■□□□□ 0.49
LYSMD4Q5XG99 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LYSMD4Q5XG99 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.11■□□□□ 0.49
LYSMD4Q5XG99 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LYSMD4Q5XG99 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.11■□□□□ 0.49
LYSMD4Q5XG99 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
LYSMD4Q5XG99 MIR7706-201ENST00000613747 67 ntBASIC18.11■□□□□ 0.49
LYSMD4Q5XG99 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.11■□□□□ 0.49
LYSMD4Q5XG99 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.11■□□□□ 0.49
LYSMD4Q5XG99 AL355877.3-201ENST00000622820 899 ntBASIC18.11■□□□□ 0.49
LYSMD4Q5XG99 ZNF259P1-201ENST00000407656 1365 ntBASIC18.11■□□□□ 0.49
LYSMD4Q5XG99 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LYSMD4Q5XG99 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.11■□□□□ 0.49
LYSMD4Q5XG99 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LYSMD4Q5XG99 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.11■□□□□ 0.49
LYSMD4Q5XG99 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.11■□□□□ 0.49
LYSMD4Q5XG99 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.11■□□□□ 0.49
LYSMD4Q5XG99 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
LYSMD4Q5XG99 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LYSMD4Q5XG99 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.11■□□□□ 0.49
LYSMD4Q5XG99 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LYSMD4Q5XG99 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LYSMD4Q5XG99 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LYSMD4Q5XG99 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LYSMD4Q5XG99 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.1■□□□□ 0.49
LYSMD4Q5XG99 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LYSMD4Q5XG99 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.1■□□□□ 0.49
LYSMD4Q5XG99 HEIH-201ENST00000623091 1652 ntBASIC18.1■□□□□ 0.49
LYSMD4Q5XG99 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.1■□□□□ 0.49
LYSMD4Q5XG99 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
LYSMD4Q5XG99 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LYSMD4Q5XG99 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.1■□□□□ 0.49
LYSMD4Q5XG99 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LYSMD4Q5XG99 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.1■□□□□ 0.49
LYSMD4Q5XG99 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
LYSMD4Q5XG99 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LYSMD4Q5XG99 RCN1P2-201ENST00000398357 915 ntBASIC18.1■□□□□ 0.49
LYSMD4Q5XG99 RBM17P3-201ENST00000417687 1192 ntBASIC18.1■□□□□ 0.49
LYSMD4Q5XG99 BX842568.4-201ENST00000421222 227 ntBASIC18.1■□□□□ 0.49
LYSMD4Q5XG99 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.1■□□□□ 0.49
LYSMD4Q5XG99 SCARNA2-201ENST00000458748 420 ntBASIC18.1■□□□□ 0.49
LYSMD4Q5XG99 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LYSMD4Q5XG99 RPL13AP23-201ENST00000480739 586 ntBASIC18.1■□□□□ 0.49
LYSMD4Q5XG99 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.1■□□□□ 0.49
LYSMD4Q5XG99 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.1■□□□□ 0.49
LYSMD4Q5XG99 AL049840.3-201ENST00000602669 611 ntBASIC18.1■□□□□ 0.49
LYSMD4Q5XG99 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LYSMD4Q5XG99 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LYSMD4Q5XG99 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LYSMD4Q5XG99 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LYSMD4Q5XG99 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LYSMD4Q5XG99 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LYSMD4Q5XG99 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LYSMD4Q5XG99 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LYSMD4Q5XG99 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.09■□□□□ 0.49
LYSMD4Q5XG99 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LYSMD4Q5XG99 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LYSMD4Q5XG99 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LYSMD4Q5XG99 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LYSMD4Q5XG99 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.09■□□□□ 0.49
LYSMD4Q5XG99 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.09■□□□□ 0.49
LYSMD4Q5XG99 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LYSMD4Q5XG99 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.09■□□□□ 0.49
LYSMD4Q5XG99 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.09■□□□□ 0.49
LYSMD4Q5XG99 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LYSMD4Q5XG99 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
LYSMD4Q5XG99 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.09■□□□□ 0.49
LYSMD4Q5XG99 AC113404.2-201ENST00000507884 177 ntBASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms