Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6-2Q5R1I4 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6-2Q5R1I4 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6-2Q5R1I4 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6-2Q5R1I4 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-2Q5R1I4 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-2Q5R1I4 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-2Q5R1I4 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.7□□□□□ -0.22
Trav6-2Q5R1I4 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-2Q5R1I4 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav6-2Q5R1I4 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav6-2Q5R1I4 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-2Q5R1I4 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav6-2Q5R1I4 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-2Q5R1I4 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
Trav6-2Q5R1I4 Gm14701-201ENSMUST00000117156 348 ntBASIC13.7□□□□□ -0.22
Trav6-2Q5R1I4 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.7□□□□□ -0.22
Trav6-2Q5R1I4 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav6-2Q5R1I4 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.7□□□□□ -0.22
Trav6-2Q5R1I4 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.7□□□□□ -0.22
Trav6-2Q5R1I4 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-2Q5R1I4 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-2Q5R1I4 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-2Q5R1I4 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-2Q5R1I4 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav6-2Q5R1I4 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-2Q5R1I4 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-2Q5R1I4 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-2Q5R1I4 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-2Q5R1I4 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-2Q5R1I4 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-2Q5R1I4 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-2Q5R1I4 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-2Q5R1I4 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-2Q5R1I4 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-2Q5R1I4 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-2Q5R1I4 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav6-2Q5R1I4 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav6-2Q5R1I4 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-2Q5R1I4 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-2Q5R1I4 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-2Q5R1I4 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav6-2Q5R1I4 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-2Q5R1I4 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-2Q5R1I4 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav6-2Q5R1I4 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-2Q5R1I4 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav6-2Q5R1I4 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav6-2Q5R1I4 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-2Q5R1I4 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav6-2Q5R1I4 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.69□□□□□ -0.22
Trav6-2Q5R1I4 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav6-2Q5R1I4 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-2Q5R1I4 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-2Q5R1I4 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-2Q5R1I4 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-2Q5R1I4 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-2Q5R1I4 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-2Q5R1I4 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-2Q5R1I4 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav6-2Q5R1I4 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-2Q5R1I4 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav6-2Q5R1I4 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav6-2Q5R1I4 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-2Q5R1I4 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-2Q5R1I4 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav6-2Q5R1I4 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-2Q5R1I4 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-2Q5R1I4 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.68□□□□□ -0.22
Trav6-2Q5R1I4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-2Q5R1I4 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-2Q5R1I4 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav6-2Q5R1I4 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-2Q5R1I4 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-2Q5R1I4 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-2Q5R1I4 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-2Q5R1I4 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-2Q5R1I4 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-2Q5R1I4 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-2Q5R1I4 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav6-2Q5R1I4 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.68□□□□□ -0.22
Trav6-2Q5R1I4 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.68□□□□□ -0.22
Trav6-2Q5R1I4 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-2Q5R1I4 Gm27301-201ENSMUST00000184012 127 ntBASIC13.68□□□□□ -0.22
Trav6-2Q5R1I4 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.68□□□□□ -0.22
Trav6-2Q5R1I4 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-2Q5R1I4 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav6-2Q5R1I4 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Trav6-2Q5R1I4 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.68□□□□□ -0.22
Trav6-2Q5R1I4 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-2Q5R1I4 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-2Q5R1I4 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-2Q5R1I4 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav6-2Q5R1I4 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav6-2Q5R1I4 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav6-2Q5R1I4 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-2Q5R1I4 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-2Q5R1I4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-2Q5R1I4 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.67□□□□□ -0.22
Trav6-2Q5R1I4 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms