Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm45880-201ENSMUST00000213041 853 ntBASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Gm46209-201ENSMUST00000217912 553 ntBASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Gm19220-201ENSMUST00000222682 803 ntBASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC8.22□□□□□ -1.09
Ush2AQ2QI47 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ush2AQ2QI47 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ush2AQ2QI47 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ush2AQ2QI47 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC8.22□□□□□ -1.09
Ush2AQ2QI47 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ush2AQ2QI47 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ush2AQ2QI47 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
Ush2AQ2QI47 Gm7558-201ENSMUST00000193221 1165 ntBASIC8.22□□□□□ -1.09
Ush2AQ2QI47 Klk2-ps-201ENSMUST00000205342 571 ntBASIC8.22□□□□□ -1.09
Ush2AQ2QI47 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ush2AQ2QI47 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ush2AQ2QI47 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ush2AQ2QI47 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ush2AQ2QI47 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ush2AQ2QI47 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ush2AQ2QI47 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Ush2AQ2QI47 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC8.22□□□□□ -1.09
Ush2AQ2QI47 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ush2AQ2QI47 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ush2AQ2QI47 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ush2AQ2QI47 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ush2AQ2QI47 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ush2AQ2QI47 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC8.22□□□□□ -1.09
Ush2AQ2QI47 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC8.22□□□□□ -1.09
Ush2AQ2QI47 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ush2AQ2QI47 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ush2AQ2QI47 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ush2AQ2QI47 Gm24543-201ENSMUST00000103867 82 ntBASIC8.22□□□□□ -1.09
Ush2AQ2QI47 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC8.22□□□□□ -1.09
Ush2AQ2QI47 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC8.22□□□□□ -1.09
Ush2AQ2QI47 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC8.22□□□□□ -1.09
Ush2AQ2QI47 AC139580.1-202ENSMUST00000223574 928 ntBASIC8.22□□□□□ -1.09
Ush2AQ2QI47 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ush2AQ2QI47 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ush2AQ2QI47 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ush2AQ2QI47 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ush2AQ2QI47 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ush2AQ2QI47 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ush2AQ2QI47 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC8.21□□□□□ -1.09
Ush2AQ2QI47 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC8.21□□□□□ -1.09
Ush2AQ2QI47 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Ush2AQ2QI47 AC154527.2-201ENSMUST00000225256 1466 ntBASIC8.21□□□□□ -1.09
Ush2AQ2QI47 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Ush2AQ2QI47 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Ush2AQ2QI47 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC8.21□□□□□ -1.09
Ush2AQ2QI47 Mir6979-201ENSMUST00000183927 56 ntBASIC8.21□□□□□ -1.09
Ush2AQ2QI47 AC154687.2-201ENSMUST00000223853 640 ntBASIC8.21□□□□□ -1.09
Ush2AQ2QI47 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
Ush2AQ2QI47 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Ush2AQ2QI47 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Ush2AQ2QI47 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Ush2AQ2QI47 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC8.21□□□□□ -1.09
Ush2AQ2QI47 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Ush2AQ2QI47 Zscan30-202ENSMUST00000224144 1458 ntBASIC8.21□□□□□ -1.09
Ush2AQ2QI47 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Ush2AQ2QI47 Gm22018-201ENSMUST00000104357 131 ntBASIC8.21□□□□□ -1.09
Ush2AQ2QI47 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC8.21□□□□□ -1.09
Ush2AQ2QI47 Gm38230-201ENSMUST00000193572 1159 ntBASIC8.21□□□□□ -1.09
Ush2AQ2QI47 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC8.21□□□□□ -1.09
Ush2AQ2QI47 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC8.21□□□□□ -1.09
Ush2AQ2QI47 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Ush2AQ2QI47 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ush2AQ2QI47 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ush2AQ2QI47 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ush2AQ2QI47 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC8.21□□□□□ -1.1
Ush2AQ2QI47 Gm11543-201ENSMUST00000120758 370 ntBASIC8.21□□□□□ -1.1
Ush2AQ2QI47 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Ush2AQ2QI47 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ush2AQ2QI47 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ush2AQ2QI47 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ush2AQ2QI47 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ush2AQ2QI47 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC8.21□□□□□ -1.1
Ush2AQ2QI47 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ush2AQ2QI47 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ush2AQ2QI47 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Ush2AQ2QI47 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC8.21□□□□□ -1.1
Ush2AQ2QI47 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Ush2AQ2QI47 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Ush2AQ2QI47 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC8.21□□□□□ -1.1
Ush2AQ2QI47 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC8.21□□□□□ -1.1
Ush2AQ2QI47 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Ush2AQ2QI47 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms