Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-1P50220 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-1P50220 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-1P50220 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.99□□□□□ -0.33
Nkx2-1P50220 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-1P50220 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-1P50220 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC12.99□□□□□ -0.33
Nkx2-1P50220 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-1P50220 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-1P50220 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-1P50220 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-1P50220 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-1P50220 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-1P50220 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Nkx2-1P50220 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-1P50220 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.99□□□□□ -0.33
Nkx2-1P50220 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-1P50220 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Nkx2-1P50220 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-1P50220 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-1P50220 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-1P50220 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.98□□□□□ -0.33
Nkx2-1P50220 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.98□□□□□ -0.33
Nkx2-1P50220 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-1P50220 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-1P50220 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC12.97□□□□□ -0.33
Nkx2-1P50220 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-1P50220 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-1P50220 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms