Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AL031284.1-201ENST00000419297 478 ntBASIC20.89■□□□□ 0.93
HOXC6P09630 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
HOXC6P09630 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
HOXC6P09630 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.89■□□□□ 0.93
HOXC6P09630 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.89■□□□□ 0.93
HOXC6P09630 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.89■□□□□ 0.93
HOXC6P09630 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
HOXC6P09630 AL591684.3-201ENST00000605187 298 ntBASIC20.89■□□□□ 0.93
HOXC6P09630 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HOXC6P09630 AC139530.3-201ENST00000620344 690 ntBASIC20.89■□□□□ 0.93
HOXC6P09630 AC141586.3-201ENST00000562166 1838 ntBASIC20.89■□□□□ 0.93
HOXC6P09630 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXC6P09630 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.88■□□□□ 0.93
HOXC6P09630 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.88■□□□□ 0.93
HOXC6P09630 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
HOXC6P09630 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.88■□□□□ 0.93
HOXC6P09630 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXC6P09630 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXC6P09630 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HOXC6P09630 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.88■□□□□ 0.93
HOXC6P09630 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.88■□□□□ 0.93
HOXC6P09630 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXC6P09630 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.88■□□□□ 0.93
HOXC6P09630 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXC6P09630 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.88■□□□□ 0.93
HOXC6P09630 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXC6P09630 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.88■□□□□ 0.93
HOXC6P09630 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.88■□□□□ 0.93
HOXC6P09630 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
HOXC6P09630 AC114341.1-201ENST00000618070 349 ntBASIC20.88■□□□□ 0.93
HOXC6P09630 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXC6P09630 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
HOXC6P09630 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
HOXC6P09630 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.88■□□□□ 0.93
HOXC6P09630 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXC6P09630 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HOXC6P09630 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.87■□□□□ 0.93
HOXC6P09630 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HOXC6P09630 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
HOXC6P09630 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HOXC6P09630 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HOXC6P09630 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.87■□□□□ 0.93
HOXC6P09630 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HOXC6P09630 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HOXC6P09630 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HOXC6P09630 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HOXC6P09630 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.87■□□□□ 0.93
HOXC6P09630 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HOXC6P09630 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.87■□□□□ 0.93
HOXC6P09630 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.87■□□□□ 0.93
HOXC6P09630 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HOXC6P09630 SLC25A1P1-201ENST00000528351 927 ntBASIC20.87■□□□□ 0.93
HOXC6P09630 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.87■□□□□ 0.93
HOXC6P09630 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
HOXC6P09630 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
HOXC6P09630 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.87■□□□□ 0.93
HOXC6P09630 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.87■□□□□ 0.93
HOXC6P09630 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HOXC6P09630 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HOXC6P09630 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
HOXC6P09630 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HOXC6P09630 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HOXC6P09630 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HOXC6P09630 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HOXC6P09630 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HOXC6P09630 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.86■□□□□ 0.93
HOXC6P09630 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.86■□□□□ 0.93
HOXC6P09630 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.86■□□□□ 0.93
HOXC6P09630 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HOXC6P09630 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HOXC6P09630 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
HOXC6P09630 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HOXC6P09630 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HOXC6P09630 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HOXC6P09630 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HOXC6P09630 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HOXC6P09630 AL357033.4-201ENST00000617703 1807 ntBASIC20.85■□□□□ 0.93
HOXC6P09630 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
HOXC6P09630 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HOXC6P09630 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.85■□□□□ 0.93
HOXC6P09630 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HOXC6P09630 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HOXC6P09630 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
HOXC6P09630 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.85■□□□□ 0.93
HOXC6P09630 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.85■□□□□ 0.93
HOXC6P09630 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.85■□□□□ 0.93
HOXC6P09630 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.85■□□□□ 0.93
HOXC6P09630 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HOXC6P09630 AF186996.4-201ENST00000467186 377 ntBASIC20.85■□□□□ 0.93
HOXC6P09630 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.85■□□□□ 0.93
HOXC6P09630 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.85■□□□□ 0.93
HOXC6P09630 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.85■□□□□ 0.93
HOXC6P09630 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.85■□□□□ 0.93
HOXC6P09630 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.85■□□□□ 0.93
HOXC6P09630 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.85■□□□□ 0.93
HOXC6P09630 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HOXC6P09630 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HOXC6P09630 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.85■□□□□ 0.93
HOXC6P09630 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
HOXC6P09630 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms