Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.04□□□□□ -0.16
Cops3O88543 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.04□□□□□ -0.16
Cops3O88543 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.04□□□□□ -0.16
Cops3O88543 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cops3O88543 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.04□□□□□ -0.16
Cops3O88543 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.04□□□□□ -0.16
Cops3O88543 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.04□□□□□ -0.16
Cops3O88543 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cops3O88543 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cops3O88543 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cops3O88543 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cops3O88543 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cops3O88543 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cops3O88543 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cops3O88543 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cops3O88543 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Cops3O88543 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cops3O88543 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cops3O88543 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cops3O88543 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cops3O88543 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cops3O88543 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cops3O88543 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.03□□□□□ -0.16
Cops3O88543 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cops3O88543 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cops3O88543 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cops3O88543 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cops3O88543 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cops3O88543 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cops3O88543 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.03□□□□□ -0.16
Cops3O88543 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Cops3O88543 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.03□□□□□ -0.16
Cops3O88543 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cops3O88543 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cops3O88543 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cops3O88543 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cops3O88543 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cops3O88543 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cops3O88543 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cops3O88543 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cops3O88543 BC037039-201ENSMUST00000192003 2205 ntBASIC14.03□□□□□ -0.16
Cops3O88543 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cops3O88543 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cops3O88543 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cops3O88543 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Cops3O88543 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Cops3O88543 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.02□□□□□ -0.16
Cops3O88543 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cops3O88543 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cops3O88543 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.02□□□□□ -0.16
Cops3O88543 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cops3O88543 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cops3O88543 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cops3O88543 Gm15565-201ENSMUST00000118890 427 ntBASIC14.02□□□□□ -0.17
Cops3O88543 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.02□□□□□ -0.17
Cops3O88543 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.02□□□□□ -0.17
Cops3O88543 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cops3O88543 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cops3O88543 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Cops3O88543 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cops3O88543 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cops3O88543 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cops3O88543 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cops3O88543 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cops3O88543 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Cops3O88543 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.02□□□□□ -0.17
Cops3O88543 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cops3O88543 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops3O88543 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops3O88543 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops3O88543 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops3O88543 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cops3O88543 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops3O88543 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops3O88543 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops3O88543 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops3O88543 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops3O88543 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cops3O88543 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.01□□□□□ -0.17
Cops3O88543 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cops3O88543 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cops3O88543 Gm22697-201ENSMUST00000175194 63 ntBASIC14.01□□□□□ -0.17
Cops3O88543 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
Cops3O88543 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops3O88543 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.01□□□□□ -0.17
Cops3O88543 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops3O88543 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops3O88543 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cops3O88543 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops3O88543 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops3O88543 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops3O88543 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cops3O88543 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cops3O88543 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.01□□□□□ -0.17
Cops3O88543 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops3O88543 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops3O88543 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cops3O88543 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cops3O88543 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Cops3O88543 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms