Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1hO88427 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1hO88427 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1hO88427 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1hO88427 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.13■□□□□ 0.01
Cacna1hO88427 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1hO88427 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1hO88427 Gm38225-201ENSMUST00000194001 393 ntBASIC15.13■□□□□ 0.01
Cacna1hO88427 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC15.13■□□□□ 0.01
Cacna1hO88427 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1hO88427 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1hO88427 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1hO88427 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1hO88427 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cacna1hO88427 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Cacna1hO88427 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1hO88427 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.13■□□□□ 0.01
Cacna1hO88427 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1hO88427 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC15.13■□□□□ 0.01
Cacna1hO88427 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1hO88427 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1hO88427 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1hO88427 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1hO88427 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1hO88427 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1hO88427 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1hO88427 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Cacna1hO88427 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1hO88427 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1hO88427 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1hO88427 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cacna1hO88427 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1hO88427 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.12■□□□□ 0.01
Cacna1hO88427 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.12■□□□□ 0.01
Cacna1hO88427 Shd-206ENSMUST00000225145 998 ntBASIC15.12■□□□□ 0.01
Cacna1hO88427 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1hO88427 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.12■□□□□ 0.01
Cacna1hO88427 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1hO88427 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1hO88427 Gm4875-201ENSMUST00000118257 786 ntBASIC15.12■□□□□ 0.01
Cacna1hO88427 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.12■□□□□ 0.01
Cacna1hO88427 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cacna1hO88427 Gm5035-201ENSMUST00000215581 927 ntBASIC15.12■□□□□ 0.01
Cacna1hO88427 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1hO88427 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1hO88427 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1hO88427 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1hO88427 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1hO88427 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1hO88427 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.11■□□□□ 0.01
Cacna1hO88427 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1hO88427 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cacna1hO88427 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1hO88427 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Cacna1hO88427 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1hO88427 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1hO88427 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cacna1hO88427 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Cacna1hO88427 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1hO88427 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1hO88427 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1hO88427 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC15.11■□□□□ 0.01
Cacna1hO88427 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.11■□□□□ 0.01
Cacna1hO88427 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1hO88427 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1hO88427 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1hO88427 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1hO88427 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Cacna1hO88427 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1hO88427 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1hO88427 Gm15198-201ENSMUST00000117283 177 ntBASIC15.1■□□□□ 0.01
Cacna1hO88427 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Cacna1hO88427 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1hO88427 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1hO88427 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1hO88427 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1hO88427 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1hO88427 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC15.1■□□□□ 0.01
Cacna1hO88427 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.1■□□□□ 0.01
Cacna1hO88427 Gm12742-201ENSMUST00000117326 410 ntBASIC15.1■□□□□ 0.01
Cacna1hO88427 Gm12957-201ENSMUST00000117835 377 ntBASIC15.1■□□□□ 0.01
Cacna1hO88427 Mir1982-201ENSMUST00000157368 74 ntBASIC15.1■□□□□ 0.01
Cacna1hO88427 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.1■□□□□ 0.01
Cacna1hO88427 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1hO88427 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1hO88427 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1hO88427 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1hO88427 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Cacna1hO88427 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1hO88427 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1hO88427 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1hO88427 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Cacna1hO88427 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Cacna1hO88427 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1hO88427 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1hO88427 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Cacna1hO88427 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1hO88427 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.09■□□□□ 0.01
Cacna1hO88427 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.09■□□□□ 0.01
Cacna1hO88427 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms