Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Stx1aO35526 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Stx1aO35526 Gm8587-201ENSMUST00000076538 843 ntBASIC17.59■□□□□ 0.41
Stx1aO35526 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Stx1aO35526 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Stx1aO35526 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Stx1aO35526 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.59■□□□□ 0.41
Stx1aO35526 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Stx1aO35526 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Stx1aO35526 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Stx1aO35526 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Stx1aO35526 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Stx1aO35526 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Stx1aO35526 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Stx1aO35526 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Stx1aO35526 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Stx1aO35526 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.58■□□□□ 0.41
Stx1aO35526 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Stx1aO35526 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Stx1aO35526 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Stx1aO35526 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Stx1aO35526 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Stx1aO35526 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Stx1aO35526 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Stx1aO35526 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.58■□□□□ 0.4
Stx1aO35526 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Stx1aO35526 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.58■□□□□ 0.4
Stx1aO35526 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Stx1aO35526 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Stx1aO35526 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Stx1aO35526 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Stx1aO35526 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Stx1aO35526 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Stx1aO35526 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Stx1aO35526 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Stx1aO35526 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Stx1aO35526 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Stx1aO35526 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Stx1aO35526 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Stx1aO35526 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Stx1aO35526 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Stx1aO35526 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.57■□□□□ 0.4
Stx1aO35526 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Stx1aO35526 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Stx1aO35526 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Stx1aO35526 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Stx1aO35526 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Stx1aO35526 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Stx1aO35526 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.57■□□□□ 0.4
Stx1aO35526 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.57■□□□□ 0.4
Stx1aO35526 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Stx1aO35526 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Stx1aO35526 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.57■□□□□ 0.4
Stx1aO35526 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.57■□□□□ 0.4
Stx1aO35526 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Stx1aO35526 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Stx1aO35526 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.57■□□□□ 0.4
Stx1aO35526 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Stx1aO35526 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Stx1aO35526 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Stx1aO35526 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Stx1aO35526 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.57■□□□□ 0.4
Stx1aO35526 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Stx1aO35526 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Stx1aO35526 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Stx1aO35526 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stx1aO35526 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Stx1aO35526 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stx1aO35526 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Stx1aO35526 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Stx1aO35526 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.56■□□□□ 0.4
Stx1aO35526 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stx1aO35526 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Stx1aO35526 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Stx1aO35526 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Stx1aO35526 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stx1aO35526 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stx1aO35526 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stx1aO35526 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Stx1aO35526 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Stx1aO35526 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stx1aO35526 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.56■□□□□ 0.4
Stx1aO35526 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stx1aO35526 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Stx1aO35526 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Stx1aO35526 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stx1aO35526 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stx1aO35526 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stx1aO35526 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Stx1aO35526 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stx1aO35526 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stx1aO35526 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Stx1aO35526 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stx1aO35526 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stx1aO35526 Gm11355-201ENSMUST00000121120 306 ntBASIC17.55■□□□□ 0.4
Stx1aO35526 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
Stx1aO35526 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.55■□□□□ 0.4
Stx1aO35526 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stx1aO35526 Gm7367-201ENSMUST00000057611 492 ntBASIC17.55■□□□□ 0.4
Stx1aO35526 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms