Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Gm15565-201ENSMUST00000118890 427 ntBASIC12.39□□□□□ -0.43
Efnb3O35393 Gm13436-201ENSMUST00000120418 567 ntBASIC12.39□□□□□ -0.43
Efnb3O35393 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.39□□□□□ -0.43
Efnb3O35393 Gm2274-201ENSMUST00000184539 609 ntBASIC12.39□□□□□ -0.43
Efnb3O35393 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Efnb3O35393 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.39□□□□□ -0.43
Efnb3O35393 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.39□□□□□ -0.43
Efnb3O35393 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Efnb3O35393 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Efnb3O35393 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Efnb3O35393 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Efnb3O35393 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Efnb3O35393 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Efnb3O35393 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.39□□□□□ -0.43
Efnb3O35393 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Efnb3O35393 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Efnb3O35393 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Efnb3O35393 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Efnb3O35393 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Efnb3O35393 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Efnb3O35393 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.39□□□□□ -0.43
Efnb3O35393 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Efnb3O35393 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Efnb3O35393 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Efnb3O35393 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.38□□□□□ -0.43
Efnb3O35393 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Efnb3O35393 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Efnb3O35393 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Efnb3O35393 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Efnb3O35393 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Efnb3O35393 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Efnb3O35393 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Efnb3O35393 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Efnb3O35393 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Efnb3O35393 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.38□□□□□ -0.43
Efnb3O35393 Gm6433-201ENSMUST00000118634 875 ntBASIC12.38□□□□□ -0.43
Efnb3O35393 Gm13474-201ENSMUST00000122466 815 ntBASIC12.38□□□□□ -0.43
Efnb3O35393 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.38□□□□□ -0.43
Efnb3O35393 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Efnb3O35393 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Efnb3O35393 Gm43799-201ENSMUST00000201845 579 ntBASIC12.38□□□□□ -0.43
Efnb3O35393 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Efnb3O35393 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Efnb3O35393 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Efnb3O35393 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Efnb3O35393 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Efnb3O35393 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Efnb3O35393 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Efnb3O35393 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Efnb3O35393 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.38□□□□□ -0.43
Efnb3O35393 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Efnb3O35393 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Efnb3O35393 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Efnb3O35393 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Efnb3O35393 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Efnb3O35393 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Efnb3O35393 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Efnb3O35393 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Efnb3O35393 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Efnb3O35393 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Efnb3O35393 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Efnb3O35393 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Efnb3O35393 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Efnb3O35393 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Efnb3O35393 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.37□□□□□ -0.43
Efnb3O35393 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Efnb3O35393 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Efnb3O35393 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Efnb3O35393 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.37□□□□□ -0.43
Efnb3O35393 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Efnb3O35393 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Efnb3O35393 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Efnb3O35393 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Efnb3O35393 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Efnb3O35393 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Efnb3O35393 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Efnb3O35393 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Efnb3O35393 Gm16061-201ENSMUST00000122167 857 ntBASIC12.37□□□□□ -0.43
Efnb3O35393 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Efnb3O35393 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.37□□□□□ -0.43
Efnb3O35393 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Efnb3O35393 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Efnb3O35393 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Efnb3O35393 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Efnb3O35393 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Efnb3O35393 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Efnb3O35393 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Efnb3O35393 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Efnb3O35393 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.37□□□□□ -0.43
Efnb3O35393 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Efnb3O35393 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Efnb3O35393 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Efnb3O35393 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Efnb3O35393 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.37□□□□□ -0.43
Efnb3O35393 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Efnb3O35393 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.37□□□□□ -0.43
Efnb3O35393 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Efnb3O35393 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.37□□□□□ -0.43
Efnb3O35393 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Efnb3O35393 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms