Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Alx4O35137 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx4O35137 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Alx4O35137 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx4O35137 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx4O35137 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx4O35137 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx4O35137 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx4O35137 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.95□□□□□ -0.18
Alx4O35137 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Alx4O35137 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.95□□□□□ -0.18
Alx4O35137 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
Alx4O35137 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx4O35137 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx4O35137 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Alx4O35137 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Alx4O35137 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Alx4O35137 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx4O35137 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.95□□□□□ -0.18
Alx4O35137 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx4O35137 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.95□□□□□ -0.18
Alx4O35137 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx4O35137 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Alx4O35137 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx4O35137 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx4O35137 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Alx4O35137 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx4O35137 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Alx4O35137 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx4O35137 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx4O35137 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx4O35137 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Alx4O35137 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx4O35137 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Alx4O35137 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx4O35137 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx4O35137 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Alx4O35137 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Alx4O35137 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.94□□□□□ -0.18
Alx4O35137 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Alx4O35137 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC13.94□□□□□ -0.18
Alx4O35137 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Alx4O35137 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Alx4O35137 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx4O35137 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx4O35137 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Alx4O35137 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx4O35137 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Alx4O35137 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx4O35137 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx4O35137 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx4O35137 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx4O35137 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Alx4O35137 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Alx4O35137 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx4O35137 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx4O35137 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Alx4O35137 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx4O35137 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx4O35137 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx4O35137 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx4O35137 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.93□□□□□ -0.18
Alx4O35137 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx4O35137 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.93□□□□□ -0.18
Alx4O35137 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx4O35137 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.93□□□□□ -0.18
Alx4O35137 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx4O35137 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx4O35137 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx4O35137 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.93□□□□□ -0.18
Alx4O35137 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx4O35137 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Alx4O35137 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx4O35137 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx4O35137 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.93□□□□□ -0.18
Alx4O35137 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx4O35137 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx4O35137 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx4O35137 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx4O35137 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.93□□□□□ -0.18
Alx4O35137 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Alx4O35137 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx4O35137 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx4O35137 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx4O35137 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx4O35137 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx4O35137 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Alx4O35137 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Alx4O35137 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Alx4O35137 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Alx4O35137 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Alx4O35137 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Alx4O35137 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Alx4O35137 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Alx4O35137 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC13.92□□□□□ -0.18
Alx4O35137 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.92□□□□□ -0.18
Alx4O35137 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Alx4O35137 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Alx4O35137 Gm9987-201ENSMUST00000069768 567 ntBASIC13.92□□□□□ -0.18
Alx4O35137 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms