Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav13d-4A0A0G2JFX3 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav13d-4A0A0G2JFX3 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13d-4A0A0G2JFX3 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC10.79□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Gm37055-201ENSMUST00000191866 133 ntBASIC10.79□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC10.79□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Gm38327-201ENSMUST00000195852 1755 ntBASIC10.79□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC10.79□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC10.79□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Mir5130-201ENSMUST00000175160 84 ntBASIC10.78□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC10.78□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC10.78□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav13d-4A0A0G2JFX3 AC122351.1-201ENSMUST00000220467 126 ntBASIC10.78□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Trav13d-4A0A0G2JFX3 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC10.78□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13d-4A0A0G2JFX3 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms