Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav12d-3A0A075B6A4 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Trav12d-3A0A075B6A4 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-3A0A075B6A4 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-3A0A075B6A4 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-3A0A075B6A4 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-3A0A075B6A4 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-3A0A075B6A4 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-3A0A075B6A4 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-3A0A075B6A4 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-3A0A075B6A4 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav12d-3A0A075B6A4 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC11.7□□□□□ -0.54
Trav12d-3A0A075B6A4 Gm21168-201ENSMUST00000199646 1096 ntBASIC11.7□□□□□ -0.54
Trav12d-3A0A075B6A4 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC11.7□□□□□ -0.54
Trav12d-3A0A075B6A4 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-3A0A075B6A4 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-3A0A075B6A4 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-3A0A075B6A4 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav12d-3A0A075B6A4 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-3A0A075B6A4 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav12d-3A0A075B6A4 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-3A0A075B6A4 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-3A0A075B6A4 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-3A0A075B6A4 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Gm7290-201ENSMUST00000104990 617 ntBASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Gm12918-201ENSMUST00000120234 636 ntBASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Gm15710-201ENSMUST00000121821 636 ntBASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Gm18958-201ENSMUST00000174258 762 ntBASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Gm26524-201ENSMUST00000192339 390 ntBASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Gm5075-201ENSMUST00000196916 622 ntBASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Gm18025-201ENSMUST00000221733 862 ntBASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-3A0A075B6A4 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-3A0A075B6A4 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-3A0A075B6A4 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-3A0A075B6A4 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-3A0A075B6A4 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-3A0A075B6A4 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-3A0A075B6A4 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Trav12d-3A0A075B6A4 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav12d-3A0A075B6A4 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-3A0A075B6A4 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-3A0A075B6A4 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav12d-3A0A075B6A4 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-3A0A075B6A4 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-3A0A075B6A4 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-3A0A075B6A4 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-3A0A075B6A4 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Trav12d-3A0A075B6A4 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-3A0A075B6A4 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC11.68□□□□□ -0.54
Trav12d-3A0A075B6A4 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC11.68□□□□□ -0.54
Trav12d-3A0A075B6A4 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav12d-3A0A075B6A4 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav12d-3A0A075B6A4 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-3A0A075B6A4 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-3A0A075B6A4 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav12d-3A0A075B6A4 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-3A0A075B6A4 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-3A0A075B6A4 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms