Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7n-4A0A075B620 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Trav7n-4A0A075B620 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7n-4A0A075B620 Gm10710-201ENSMUST00000047876 3971 ntBASIC11.88□□□□□ -0.51
Trav7n-4A0A075B620 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7n-4A0A075B620 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav7n-4A0A075B620 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7n-4A0A075B620 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7n-4A0A075B620 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-4A0A075B620 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC11.87□□□□□ -0.51
Trav7n-4A0A075B620 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-4A0A075B620 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-4A0A075B620 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-4A0A075B620 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-4A0A075B620 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav7n-4A0A075B620 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-4A0A075B620 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-4A0A075B620 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-4A0A075B620 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-4A0A075B620 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-4A0A075B620 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav7n-4A0A075B620 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav7n-4A0A075B620 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-4A0A075B620 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Trav7n-4A0A075B620 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-4A0A075B620 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC11.87□□□□□ -0.51
Trav7n-4A0A075B620 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav7n-4A0A075B620 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-4A0A075B620 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-4A0A075B620 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC11.87□□□□□ -0.51
Trav7n-4A0A075B620 Gm18115-201ENSMUST00000221209 621 ntBASIC11.87□□□□□ -0.51
Trav7n-4A0A075B620 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-4A0A075B620 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-4A0A075B620 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav7n-4A0A075B620 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-4A0A075B620 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Trav7n-4A0A075B620 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-4A0A075B620 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-4A0A075B620 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-4A0A075B620 Efs-202ENSMUST00000227037 2540 ntBASIC11.87□□□□□ -0.51
Trav7n-4A0A075B620 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-4A0A075B620 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav7n-4A0A075B620 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-4A0A075B620 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7n-4A0A075B620 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7n-4A0A075B620 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7n-4A0A075B620 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7n-4A0A075B620 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav7n-4A0A075B620 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7n-4A0A075B620 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.86□□□□□ -0.51
Trav7n-4A0A075B620 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7n-4A0A075B620 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7n-4A0A075B620 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7n-4A0A075B620 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7n-4A0A075B620 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC11.86□□□□□ -0.51
Trav7n-4A0A075B620 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7n-4A0A075B620 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav7n-4A0A075B620 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Trav7n-4A0A075B620 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav7n-4A0A075B620 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav7n-4A0A075B620 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7n-4A0A075B620 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7n-4A0A075B620 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7n-4A0A075B620 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.86□□□□□ -0.51
Trav7n-4A0A075B620 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7n-4A0A075B620 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7n-4A0A075B620 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav7n-4A0A075B620 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7n-4A0A075B620 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7n-4A0A075B620 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7n-4A0A075B620 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7n-4A0A075B620 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7n-4A0A075B620 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7n-4A0A075B620 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7n-4A0A075B620 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7n-4A0A075B620 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7n-4A0A075B620 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7n-4A0A075B620 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.85□□□□□ -0.51
Trav7n-4A0A075B620 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.85□□□□□ -0.51
Trav7n-4A0A075B620 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7n-4A0A075B620 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7n-4A0A075B620 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7n-4A0A075B620 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7n-4A0A075B620 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7n-4A0A075B620 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7n-4A0A075B620 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7n-4A0A075B620 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7n-4A0A075B620 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav7n-4A0A075B620 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav7n-4A0A075B620 AC124581.1-201ENSMUST00000225416 1399 ntBASIC11.85□□□□□ -0.51
Trav7n-4A0A075B620 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7n-4A0A075B620 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC11.85□□□□□ -0.51
Trav7n-4A0A075B620 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7n-4A0A075B620 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7n-4A0A075B620 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7n-4A0A075B620 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav7n-4A0A075B620 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7n-4A0A075B620 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Trav7n-4A0A075B620 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC11.85□□□□□ -0.51
Trav7n-4A0A075B620 Gm43697-201ENSMUST00000199637 2581 ntBASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms