Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16d-dv11A0A075B617 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC11.54□□□□□ -0.56
Trav16d-dv11A0A075B617 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16d-dv11A0A075B617 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav16d-dv11A0A075B617 Gm42569-201ENSMUST00000200539 472 ntBASIC11.54□□□□□ -0.56
Trav16d-dv11A0A075B617 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.54□□□□□ -0.56
Trav16d-dv11A0A075B617 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav16d-dv11A0A075B617 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16d-dv11A0A075B617 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16d-dv11A0A075B617 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Trav16d-dv11A0A075B617 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16d-dv11A0A075B617 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16d-dv11A0A075B617 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16d-dv11A0A075B617 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16d-dv11A0A075B617 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16d-dv11A0A075B617 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav16d-dv11A0A075B617 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Gm32996-201ENSMUST00000199828 1447 ntBASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Gm43859-201ENSMUST00000200075 1412 ntBASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 AC154855.1-201ENSMUST00000227353 1458 ntBASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16d-dv11A0A075B617 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav16d-dv11A0A075B617 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav16d-dv11A0A075B617 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav16d-dv11A0A075B617 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav16d-dv11A0A075B617 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav16d-dv11A0A075B617 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav16d-dv11A0A075B617 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav16d-dv11A0A075B617 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav16d-dv11A0A075B617 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav16d-dv11A0A075B617 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav16d-dv11A0A075B617 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav16d-dv11A0A075B617 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav16d-dv11A0A075B617 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav16d-dv11A0A075B617 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav16d-dv11A0A075B617 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC11.52□□□□□ -0.57
Trav16d-dv11A0A075B617 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav16d-dv11A0A075B617 Gm27405-201ENSMUST00000184201 112 ntBASIC11.52□□□□□ -0.57
Trav16d-dv11A0A075B617 Gm18666-201ENSMUST00000190039 958 ntBASIC11.52□□□□□ -0.57
Trav16d-dv11A0A075B617 Gm3807-201ENSMUST00000193520 1168 ntBASIC11.52□□□□□ -0.57
Trav16d-dv11A0A075B617 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav16d-dv11A0A075B617 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav16d-dv11A0A075B617 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav16d-dv11A0A075B617 Zfp264-201ENSMUST00000208656 1563 ntBASIC11.52□□□□□ -0.57
Trav16d-dv11A0A075B617 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav16d-dv11A0A075B617 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trav16d-dv11A0A075B617 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav16d-dv11A0A075B617 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav16d-dv11A0A075B617 Gm10605-202ENSMUST00000183019 3198 ntBASIC11.52□□□□□ -0.57
Trav16d-dv11A0A075B617 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Trav16d-dv11A0A075B617 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav16d-dv11A0A075B617 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav16d-dv11A0A075B617 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav16d-dv11A0A075B617 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav16d-dv11A0A075B617 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav16d-dv11A0A075B617 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Trav16d-dv11A0A075B617 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav16d-dv11A0A075B617 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms