Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.82■□□□□ 0.6
Mre11Q61216 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Mre11Q61216 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.82■□□□□ 0.6
Mre11Q61216 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mre11Q61216 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.82■□□□□ 0.6
Mre11Q61216 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Mre11Q61216 Gm38027-201ENSMUST00000192315 235 ntBASIC18.82■□□□□ 0.6
Mre11Q61216 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.82■□□□□ 0.6
Mre11Q61216 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Mre11Q61216 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mre11Q61216 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mre11Q61216 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mre11Q61216 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mre11Q61216 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mre11Q61216 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mre11Q61216 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mre11Q61216 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mre11Q61216 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mre11Q61216 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mre11Q61216 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mre11Q61216 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mre11Q61216 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mre11Q61216 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mre11Q61216 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mre11Q61216 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Mre11Q61216 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mre11Q61216 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mre11Q61216 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mre11Q61216 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Mre11Q61216 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.81■□□□□ 0.6
Mre11Q61216 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mre11Q61216 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mre11Q61216 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Mre11Q61216 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Mre11Q61216 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mre11Q61216 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Mre11Q61216 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mre11Q61216 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.81■□□□□ 0.6
Mre11Q61216 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mre11Q61216 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Mre11Q61216 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mre11Q61216 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mre11Q61216 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.8■□□□□ 0.6
Mre11Q61216 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mre11Q61216 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.8■□□□□ 0.6
Mre11Q61216 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mre11Q61216 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mre11Q61216 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mre11Q61216 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mre11Q61216 Gm10710-201ENSMUST00000047876 3971 ntBASIC18.8■□□□□ 0.6
Mre11Q61216 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mre11Q61216 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mre11Q61216 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Mre11Q61216 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC18.79■□□□□ 0.6
Mre11Q61216 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mre11Q61216 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.79■□□□□ 0.6
Mre11Q61216 Gm12085-201ENSMUST00000119263 940 ntBASIC18.79■□□□□ 0.6
Mre11Q61216 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mre11Q61216 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.79■□□□□ 0.6
Mre11Q61216 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mre11Q61216 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mre11Q61216 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC18.79■□□□□ 0.6
Mre11Q61216 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mre11Q61216 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mre11Q61216 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Mre11Q61216 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Mre11Q61216 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mre11Q61216 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mre11Q61216 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mre11Q61216 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Mre11Q61216 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mre11Q61216 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mre11Q61216 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Mre11Q61216 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Mre11Q61216 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Mre11Q61216 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mre11Q61216 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mre11Q61216 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mre11Q61216 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.78■□□□□ 0.6
Mre11Q61216 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mre11Q61216 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.78■□□□□ 0.6
Mre11Q61216 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Mre11Q61216 Gm7791-201ENSMUST00000219066 539 ntBASIC18.78■□□□□ 0.6
Mre11Q61216 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mre11Q61216 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Mre11Q61216 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Mre11Q61216 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mre11Q61216 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.78■□□□□ 0.6
Mre11Q61216 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mre11Q61216 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Mre11Q61216 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mre11Q61216 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mre11Q61216 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mre11Q61216 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mre11Q61216 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC18.77■□□□□ 0.6
Mre11Q61216 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mre11Q61216 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mre11Q61216 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Mre11Q61216 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Mre11Q61216 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms