Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgb1P63158 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgb1P63158 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Hmgb1P63158 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgb1P63158 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.23■□□□□ 0.35
Hmgb1P63158 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgb1P63158 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgb1P63158 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgb1P63158 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Hmgb1P63158 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgb1P63158 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgb1P63158 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgb1P63158 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Hmgb1P63158 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Hmgb1P63158 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgb1P63158 AA414768-201ENSMUST00000121924 1257 ntBASIC17.23■□□□□ 0.35
Hmgb1P63158 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Hmgb1P63158 Gm6659-201ENSMUST00000174752 547 ntBASIC17.23■□□□□ 0.35
Hmgb1P63158 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.23■□□□□ 0.35
Hmgb1P63158 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Hmgb1P63158 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgb1P63158 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgb1P63158 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Hmgb1P63158 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgb1P63158 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgb1P63158 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgb1P63158 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgb1P63158 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Hmgb1P63158 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.23■□□□□ 0.35
Hmgb1P63158 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgb1P63158 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgb1P63158 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgb1P63158 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgb1P63158 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgb1P63158 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgb1P63158 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Hmgb1P63158 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgb1P63158 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgb1P63158 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgb1P63158 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgb1P63158 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgb1P63158 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Hmgb1P63158 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgb1P63158 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgb1P63158 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgb1P63158 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgb1P63158 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Hmgb1P63158 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgb1P63158 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Hmgb1P63158 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgb1P63158 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.22■□□□□ 0.35
Hmgb1P63158 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgb1P63158 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgb1P63158 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgb1P63158 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
Hmgb1P63158 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgb1P63158 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.22■□□□□ 0.35
Hmgb1P63158 Gm43868-201ENSMUST00000205187 2114 ntBASIC17.22■□□□□ 0.35
Hmgb1P63158 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgb1P63158 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.22■□□□□ 0.35
Hmgb1P63158 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgb1P63158 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgb1P63158 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgb1P63158 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgb1P63158 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgb1P63158 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgb1P63158 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgb1P63158 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.21■□□□□ 0.35
Hmgb1P63158 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgb1P63158 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgb1P63158 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.21■□□□□ 0.35
Hmgb1P63158 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgb1P63158 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Hmgb1P63158 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgb1P63158 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Hmgb1P63158 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.21■□□□□ 0.35
Hmgb1P63158 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgb1P63158 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgb1P63158 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgb1P63158 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgb1P63158 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgb1P63158 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgb1P63158 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgb1P63158 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgb1P63158 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.21■□□□□ 0.35
Hmgb1P63158 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.21■□□□□ 0.35
Hmgb1P63158 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgb1P63158 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgb1P63158 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgb1P63158 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgb1P63158 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Hmgb1P63158 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgb1P63158 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgb1P63158 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Hmgb1P63158 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgb1P63158 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgb1P63158 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Hmgb1P63158 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Hmgb1P63158 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Hmgb1P63158 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms