Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vbp1P61759 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vbp1P61759 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vbp1P61759 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vbp1P61759 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vbp1P61759 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vbp1P61759 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Vbp1P61759 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.28□□□□□ -0.12
Vbp1P61759 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vbp1P61759 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vbp1P61759 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vbp1P61759 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.27□□□□□ -0.12
Vbp1P61759 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vbp1P61759 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.27□□□□□ -0.12
Vbp1P61759 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vbp1P61759 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vbp1P61759 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
Vbp1P61759 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vbp1P61759 Dio3-201ENSMUST00000097228 1449 ntBASIC14.27□□□□□ -0.12
Vbp1P61759 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vbp1P61759 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vbp1P61759 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Vbp1P61759 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.27□□□□□ -0.13
Vbp1P61759 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.13
Vbp1P61759 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Vbp1P61759 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vbp1P61759 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vbp1P61759 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.27□□□□□ -0.13
Vbp1P61759 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vbp1P61759 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vbp1P61759 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vbp1P61759 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vbp1P61759 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vbp1P61759 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.27□□□□□ -0.13
Vbp1P61759 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vbp1P61759 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.27□□□□□ -0.13
Vbp1P61759 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vbp1P61759 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vbp1P61759 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.27□□□□□ -0.13
Vbp1P61759 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.26□□□□□ -0.13
Vbp1P61759 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vbp1P61759 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vbp1P61759 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vbp1P61759 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vbp1P61759 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.26□□□□□ -0.13
Vbp1P61759 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vbp1P61759 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vbp1P61759 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vbp1P61759 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.26□□□□□ -0.13
Vbp1P61759 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vbp1P61759 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.26□□□□□ -0.13
Vbp1P61759 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.26□□□□□ -0.13
Vbp1P61759 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vbp1P61759 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vbp1P61759 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Vbp1P61759 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vbp1P61759 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vbp1P61759 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Vbp1P61759 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vbp1P61759 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vbp1P61759 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vbp1P61759 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vbp1P61759 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Vbp1P61759 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Vbp1P61759 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Vbp1P61759 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vbp1P61759 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vbp1P61759 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vbp1P61759 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.25□□□□□ -0.13
Vbp1P61759 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vbp1P61759 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.25□□□□□ -0.13
Vbp1P61759 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vbp1P61759 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vbp1P61759 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Vbp1P61759 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.25□□□□□ -0.13
Vbp1P61759 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.25□□□□□ -0.13
Vbp1P61759 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vbp1P61759 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC14.25□□□□□ -0.13
Vbp1P61759 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Vbp1P61759 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vbp1P61759 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vbp1P61759 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Vbp1P61759 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vbp1P61759 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Vbp1P61759 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vbp1P61759 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Vbp1P61759 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vbp1P61759 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vbp1P61759 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vbp1P61759 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vbp1P61759 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vbp1P61759 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vbp1P61759 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vbp1P61759 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.24□□□□□ -0.13
Vbp1P61759 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vbp1P61759 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vbp1P61759 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vbp1P61759 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vbp1P61759 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vbp1P61759 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms