Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
P01852 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
P01852 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
P01852 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
P01852 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.33□□□□□ -0.12
P01852 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P01852 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.33□□□□□ -0.12
P01852 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
P01852 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P01852 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
P01852 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P01852 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.33□□□□□ -0.12
P01852 Gm4459-201ENSMUST00000118750 468 ntBASIC14.33□□□□□ -0.12
P01852 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.33□□□□□ -0.12
P01852 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P01852 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
P01852 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
P01852 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
P01852 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P01852 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P01852 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P01852 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P01852 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P01852 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
P01852 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P01852 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P01852 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P01852 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
P01852 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.33□□□□□ -0.12
P01852 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.33□□□□□ -0.12
P01852 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
P01852 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
P01852 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P01852 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
P01852 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
P01852 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
P01852 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
P01852 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
P01852 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P01852 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
P01852 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
P01852 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
P01852 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.32□□□□□ -0.12
P01852 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
P01852 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
P01852 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P01852 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.32□□□□□ -0.12
P01852 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
P01852 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P01852 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
P01852 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
P01852 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P01852 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
P01852 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
P01852 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P01852 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
P01852 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
P01852 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P01852 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
P01852 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P01852 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
P01852 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P01852 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P01852 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
P01852 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P01852 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P01852 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
P01852 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.31□□□□□ -0.12
P01852 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.31□□□□□ -0.12
P01852 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.31□□□□□ -0.12
P01852 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P01852 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.31□□□□□ -0.12
P01852 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.31□□□□□ -0.12
P01852 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P01852 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
P01852 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
P01852 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P01852 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
P01852 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P01852 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.31□□□□□ -0.12
P01852 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P01852 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P01852 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
P01852 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
P01852 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P01852 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
P01852 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P01852 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P01852 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P01852 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
P01852 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
P01852 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.3□□□□□ -0.12
P01852 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.3□□□□□ -0.12
P01852 Gm8655-201ENSMUST00000221159 852 ntBASIC14.3□□□□□ -0.12
P01852 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P01852 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
P01852 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
P01852 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P01852 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
P01852 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms