Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.29□□□□□ -0.12
Matn3O35701 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Matn3O35701 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Matn3O35701 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Matn3O35701 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Matn3O35701 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Matn3O35701 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Matn3O35701 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.28□□□□□ -0.12
Matn3O35701 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Matn3O35701 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Matn3O35701 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Matn3O35701 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Matn3O35701 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Matn3O35701 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Matn3O35701 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.28□□□□□ -0.12
Matn3O35701 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Matn3O35701 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Matn3O35701 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Matn3O35701 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.28□□□□□ -0.12
Matn3O35701 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Matn3O35701 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.28□□□□□ -0.12
Matn3O35701 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.28□□□□□ -0.12
Matn3O35701 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Matn3O35701 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Matn3O35701 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Matn3O35701 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Matn3O35701 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Matn3O35701 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Matn3O35701 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Matn3O35701 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Matn3O35701 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Matn3O35701 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Matn3O35701 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Matn3O35701 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Matn3O35701 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Matn3O35701 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Matn3O35701 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Matn3O35701 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Matn3O35701 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Matn3O35701 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Matn3O35701 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.27□□□□□ -0.12
Matn3O35701 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Matn3O35701 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Matn3O35701 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Matn3O35701 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Matn3O35701 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Matn3O35701 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Matn3O35701 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Matn3O35701 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Matn3O35701 Gm13186-201ENSMUST00000118031 316 ntBASIC14.27□□□□□ -0.13
Matn3O35701 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
Matn3O35701 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.27□□□□□ -0.13
Matn3O35701 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.27□□□□□ -0.13
Matn3O35701 Gm43183-201ENSMUST00000200632 547 ntBASIC14.27□□□□□ -0.13
Matn3O35701 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.27□□□□□ -0.13
Matn3O35701 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Matn3O35701 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Matn3O35701 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Matn3O35701 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Matn3O35701 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Matn3O35701 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Matn3O35701 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Matn3O35701 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Matn3O35701 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Matn3O35701 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Matn3O35701 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Matn3O35701 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Matn3O35701 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Matn3O35701 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Matn3O35701 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Matn3O35701 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Matn3O35701 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.26□□□□□ -0.13
Matn3O35701 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Matn3O35701 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Matn3O35701 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Matn3O35701 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Matn3O35701 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.26□□□□□ -0.13
Matn3O35701 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.26□□□□□ -0.13
Matn3O35701 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.26□□□□□ -0.13
Matn3O35701 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Matn3O35701 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Matn3O35701 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Matn3O35701 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Matn3O35701 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Matn3O35701 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Matn3O35701 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Matn3O35701 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Matn3O35701 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Matn3O35701 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Matn3O35701 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.26□□□□□ -0.13
Matn3O35701 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Matn3O35701 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Matn3O35701 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.25□□□□□ -0.13
Matn3O35701 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Matn3O35701 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Matn3O35701 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Matn3O35701 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Matn3O35701 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Matn3O35701 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Matn3O35701 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms