Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.26■□□□□ 0.19
Ebf3O08791 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.26■□□□□ 0.19
Ebf3O08791 Gm18622-201ENSMUST00000219361 595 ntBASIC16.26■□□□□ 0.19
Ebf3O08791 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf3O08791 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf3O08791 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf3O08791 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf3O08791 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf3O08791 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf3O08791 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf3O08791 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf3O08791 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf3O08791 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ebf3O08791 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf3O08791 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf3O08791 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf3O08791 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf3O08791 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf3O08791 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf3O08791 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf3O08791 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf3O08791 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.25■□□□□ 0.19
Ebf3O08791 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf3O08791 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf3O08791 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf3O08791 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf3O08791 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf3O08791 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.25■□□□□ 0.19
Ebf3O08791 Gm23935-201ENSMUST00000102303 57 ntBASIC16.25■□□□□ 0.19
Ebf3O08791 Gm24270-201ENSMUST00000102326 57 ntBASIC16.25■□□□□ 0.19
Ebf3O08791 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.25■□□□□ 0.19
Ebf3O08791 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ebf3O08791 Gm24245-201ENSMUST00000157318 57 ntBASIC16.25■□□□□ 0.19
Ebf3O08791 Gm27397-201ENSMUST00000184997 107 ntBASIC16.25■□□□□ 0.19
Ebf3O08791 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf3O08791 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Ebf3O08791 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf3O08791 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf3O08791 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.25■□□□□ 0.19
Ebf3O08791 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Ebf3O08791 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf3O08791 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf3O08791 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf3O08791 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Ebf3O08791 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf3O08791 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Ebf3O08791 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
Ebf3O08791 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf3O08791 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf3O08791 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf3O08791 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf3O08791 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf3O08791 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf3O08791 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf3O08791 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf3O08791 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf3O08791 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.24■□□□□ 0.19
Ebf3O08791 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.24■□□□□ 0.19
Ebf3O08791 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.24■□□□□ 0.19
Ebf3O08791 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.24■□□□□ 0.19
Ebf3O08791 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.24■□□□□ 0.19
Ebf3O08791 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.24■□□□□ 0.19
Ebf3O08791 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf3O08791 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf3O08791 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf3O08791 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf3O08791 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf3O08791 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf3O08791 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf3O08791 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf3O08791 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Ebf3O08791 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf3O08791 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.23■□□□□ 0.19
Ebf3O08791 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf3O08791 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf3O08791 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf3O08791 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf3O08791 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf3O08791 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf3O08791 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ebf3O08791 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf3O08791 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf3O08791 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf3O08791 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf3O08791 Gm27646-201ENSMUST00000183989 110 ntBASIC16.23■□□□□ 0.19
Ebf3O08791 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.23■□□□□ 0.19
Ebf3O08791 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf3O08791 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf3O08791 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf3O08791 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf3O08791 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf3O08791 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf3O08791 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ebf3O08791 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.22■□□□□ 0.19
Ebf3O08791 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ebf3O08791 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ebf3O08791 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ebf3O08791 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Ebf3O08791 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ebf3O08791 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms