Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3543D3Z235 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3543D3Z235 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.18□□□□□ -0.14
Gm3543D3Z235 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3543D3Z235 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.18□□□□□ -0.14
Gm3543D3Z235 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3543D3Z235 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3543D3Z235 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Gm3543D3Z235 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3543D3Z235 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Gm3543D3Z235 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3543D3Z235 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3543D3Z235 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3543D3Z235 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3543D3Z235 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3543D3Z235 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Gm3543D3Z235 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3543D3Z235 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm3543D3Z235 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.17□□□□□ -0.14
Gm3543D3Z235 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.17□□□□□ -0.14
Gm3543D3Z235 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm3543D3Z235 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm3543D3Z235 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm3543D3Z235 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.17□□□□□ -0.14
Gm3543D3Z235 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Gm3543D3Z235 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Gm3543D3Z235 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm3543D3Z235 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm3543D3Z235 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm3543D3Z235 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm3543D3Z235 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Gm3543D3Z235 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Gm3543D3Z235 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.17□□□□□ -0.14
Gm3543D3Z235 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.17□□□□□ -0.14
Gm3543D3Z235 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm3543D3Z235 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm3543D3Z235 Gm18195-201ENSMUST00000207604 706 ntBASIC14.17□□□□□ -0.14
Gm3543D3Z235 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.17□□□□□ -0.14
Gm3543D3Z235 Rps4l-201ENSMUST00000071745 943 ntBASIC14.17□□□□□ -0.14
Gm3543D3Z235 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm3543D3Z235 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm3543D3Z235 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm3543D3Z235 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.17□□□□□ -0.14
Gm3543D3Z235 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm3543D3Z235 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm3543D3Z235 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Gm3543D3Z235 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Gm3543D3Z235 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm3543D3Z235 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Gm3543D3Z235 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm3543D3Z235 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm3543D3Z235 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm3543D3Z235 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm3543D3Z235 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm3543D3Z235 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm3543D3Z235 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm3543D3Z235 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm3543D3Z235 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm3543D3Z235 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm3543D3Z235 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.16□□□□□ -0.14
Gm3543D3Z235 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm3543D3Z235 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.16□□□□□ -0.14
Gm3543D3Z235 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm3543D3Z235 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm3543D3Z235 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm3543D3Z235 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm3543D3Z235 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Gm3543D3Z235 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.16□□□□□ -0.14
Gm3543D3Z235 Gm13884-201ENSMUST00000118103 829 ntBASIC14.16□□□□□ -0.14
Gm3543D3Z235 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm3543D3Z235 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm3543D3Z235 Gm25745-201ENSMUST00000174945 133 ntBASIC14.16□□□□□ -0.14
Gm3543D3Z235 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.16□□□□□ -0.14
Gm3543D3Z235 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm3543D3Z235 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Gm3543D3Z235 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm3543D3Z235 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm3543D3Z235 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm3543D3Z235 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm3543D3Z235 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm3543D3Z235 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm3543D3Z235 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm3543D3Z235 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm3543D3Z235 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm3543D3Z235 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3543D3Z235 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3543D3Z235 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3543D3Z235 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3543D3Z235 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3543D3Z235 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3543D3Z235 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3543D3Z235 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3543D3Z235 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3543D3Z235 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3543D3Z235 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3543D3Z235 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3543D3Z235 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Gm3543D3Z235 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3543D3Z235 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
Gm3543D3Z235 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms