Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6n-6A0A075B6B2 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6n-6A0A075B6B2 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav6n-6A0A075B6B2 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6n-6A0A075B6B2 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6n-6A0A075B6B2 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6n-6A0A075B6B2 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav6n-6A0A075B6B2 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Gm13836-201ENSMUST00000121159 501 ntBASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Gm37728-201ENSMUST00000195025 2292 ntBASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Gm9987-201ENSMUST00000069768 567 ntBASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6n-6A0A075B6B2 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 AC134329.2-201ENSMUST00000217897 428 ntBASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 AC121577.1-201ENSMUST00000227302 707 ntBASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6n-6A0A075B6B2 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6n-6A0A075B6B2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav6n-6A0A075B6B2 Gm16425-201ENSMUST00000118143 3130 ntBASIC11.71□□□□□ -0.53
Trav6n-6A0A075B6B2 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav6n-6A0A075B6B2 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6n-6A0A075B6B2 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6n-6A0A075B6B2 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6n-6A0A075B6B2 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6n-6A0A075B6B2 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6n-6A0A075B6B2 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6n-6A0A075B6B2 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6n-6A0A075B6B2 Spsb2-203ENSMUST00000112473 1322 ntBASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms