Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC22.55■■□□□ 1.2
RTFDC1Q9BY42 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTFDC1Q9BY42 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RTFDC1Q9BY42 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC22.55■■□□□ 1.2
RTFDC1Q9BY42 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RTFDC1Q9BY42 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
RTFDC1Q9BY42 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC22.55■■□□□ 1.2
RTFDC1Q9BY42 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC22.54■■□□□ 1.2
RTFDC1Q9BY42 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC22.54■■□□□ 1.2
RTFDC1Q9BY42 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.54■■□□□ 1.2
RTFDC1Q9BY42 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTFDC1Q9BY42 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTFDC1Q9BY42 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RTFDC1Q9BY42 Z98044.1-201ENST00000632503 1764 ntBASIC22.54■■□□□ 1.2
RTFDC1Q9BY42 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
RTFDC1Q9BY42 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTFDC1Q9BY42 MED22-202ENST00000371999 987 ntTSL 3 BASIC22.54■■□□□ 1.2
RTFDC1Q9BY42 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
RTFDC1Q9BY42 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
RTFDC1Q9BY42 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
RTFDC1Q9BY42 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC22.54■■□□□ 1.2
RTFDC1Q9BY42 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTFDC1Q9BY42 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTFDC1Q9BY42 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC22.54■■□□□ 1.2
RTFDC1Q9BY42 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTFDC1Q9BY42 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
RTFDC1Q9BY42 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RTFDC1Q9BY42 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTFDC1Q9BY42 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTFDC1Q9BY42 AFG3L1P-217ENST00000557444 2447 ntBASIC22.53■■□□□ 1.2
RTFDC1Q9BY42 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RTFDC1Q9BY42 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
RTFDC1Q9BY42 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RTFDC1Q9BY42 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC22.53■■□□□ 1.2
RTFDC1Q9BY42 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC22.53■■□□□ 1.2
RTFDC1Q9BY42 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RTFDC1Q9BY42 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RTFDC1Q9BY42 RPP21-221ENST00000428040 594 ntTSL 2 BASIC22.53■■□□□ 1.2
RTFDC1Q9BY42 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RTFDC1Q9BY42 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC22.53■■□□□ 1.2
RTFDC1Q9BY42 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RTFDC1Q9BY42 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC22.53■■□□□ 1.2
RTFDC1Q9BY42 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC22.53■■□□□ 1.2
RTFDC1Q9BY42 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC22.53■■□□□ 1.2
RTFDC1Q9BY42 AL591684.3-201ENST00000605187 298 ntBASIC22.53■■□□□ 1.2
RTFDC1Q9BY42 AC148477.8-201ENST00000624298 468 ntBASIC22.53■■□□□ 1.2
RTFDC1Q9BY42 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RTFDC1Q9BY42 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC22.53■■□□□ 1.2
RTFDC1Q9BY42 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC22.53■■□□□ 1.2
RTFDC1Q9BY42 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC22.52■■□□□ 1.2
RTFDC1Q9BY42 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RTFDC1Q9BY42 AC141586.3-201ENST00000562166 1838 ntBASIC22.52■■□□□ 1.2
RTFDC1Q9BY42 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RTFDC1Q9BY42 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RTFDC1Q9BY42 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RTFDC1Q9BY42 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RTFDC1Q9BY42 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RTFDC1Q9BY42 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC22.52■■□□□ 1.2
RTFDC1Q9BY42 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RTFDC1Q9BY42 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC22.52■■□□□ 1.2
RTFDC1Q9BY42 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC22.52■■□□□ 1.2
RTFDC1Q9BY42 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC22.52■■□□□ 1.2
RTFDC1Q9BY42 KRT18P41-201ENST00000518924 1277 ntBASIC22.52■■□□□ 1.2
RTFDC1Q9BY42 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC22.52■■□□□ 1.2
RTFDC1Q9BY42 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RTFDC1Q9BY42 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC22.52■■□□□ 1.2
RTFDC1Q9BY42 AC114341.1-201ENST00000618070 349 ntBASIC22.52■■□□□ 1.2
RTFDC1Q9BY42 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RTFDC1Q9BY42 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RTFDC1Q9BY42 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC22.52■■□□□ 1.2
RTFDC1Q9BY42 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
RTFDC1Q9BY42 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
RTFDC1Q9BY42 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RTFDC1Q9BY42 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RTFDC1Q9BY42 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC22.51■■□□□ 1.19
RTFDC1Q9BY42 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC22.51■■□□□ 1.19
RTFDC1Q9BY42 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC22.51■■□□□ 1.19
RTFDC1Q9BY42 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC22.51■■□□□ 1.19
RTFDC1Q9BY42 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RTFDC1Q9BY42 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RTFDC1Q9BY42 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RTFDC1Q9BY42 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RTFDC1Q9BY42 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC22.51■■□□□ 1.19
RTFDC1Q9BY42 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC22.51■■□□□ 1.19
RTFDC1Q9BY42 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC22.51■■□□□ 1.19
RTFDC1Q9BY42 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RTFDC1Q9BY42 AL357033.4-201ENST00000617703 1807 ntBASIC22.51■■□□□ 1.19
RTFDC1Q9BY42 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RTFDC1Q9BY42 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC22.51■■□□□ 1.19
RTFDC1Q9BY42 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC22.51■■□□□ 1.19
RTFDC1Q9BY42 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC22.5■■□□□ 1.19
RTFDC1Q9BY42 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC22.5■■□□□ 1.19
RTFDC1Q9BY42 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC22.5■■□□□ 1.19
RTFDC1Q9BY42 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RTFDC1Q9BY42 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RTFDC1Q9BY42 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RTFDC1Q9BY42 KRT18P13-201ENST00000400056 1290 ntBASIC22.5■■□□□ 1.19
RTFDC1Q9BY42 AC018712.1-201ENST00000455767 687 ntBASIC22.5■■□□□ 1.19
RTFDC1Q9BY42 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC22.5■■□□□ 1.19
RTFDC1Q9BY42 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms