Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm23243-201ENSMUST00000180047 110 ntBASIC16.52■□□□□ 0.24
Clp1Q99LI9 Gm24659-201ENSMUST00000180212 110 ntBASIC16.52■□□□□ 0.24
Clp1Q99LI9 Gm24169-201ENSMUST00000180244 110 ntBASIC16.52■□□□□ 0.24
Clp1Q99LI9 Gm23689-201ENSMUST00000180354 110 ntBASIC16.52■□□□□ 0.24
Clp1Q99LI9 Gm27359-201ENSMUST00000184153 110 ntBASIC16.52■□□□□ 0.24
Clp1Q99LI9 Gm27785-201ENSMUST00000184268 110 ntBASIC16.52■□□□□ 0.24
Clp1Q99LI9 Gm27466-201ENSMUST00000184396 110 ntBASIC16.52■□□□□ 0.24
Clp1Q99LI9 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.52■□□□□ 0.24
Clp1Q99LI9 Gm27703-201ENSMUST00000184836 110 ntBASIC16.52■□□□□ 0.24
Clp1Q99LI9 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Clp1Q99LI9 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.52■□□□□ 0.24
Clp1Q99LI9 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clp1Q99LI9 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Clp1Q99LI9 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clp1Q99LI9 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Clp1Q99LI9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clp1Q99LI9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Clp1Q99LI9 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Clp1Q99LI9 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clp1Q99LI9 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clp1Q99LI9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Clp1Q99LI9 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.52■□□□□ 0.23
Clp1Q99LI9 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clp1Q99LI9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clp1Q99LI9 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.52■□□□□ 0.23
Clp1Q99LI9 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Clp1Q99LI9 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Clp1Q99LI9 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clp1Q99LI9 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.51■□□□□ 0.23
Clp1Q99LI9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Clp1Q99LI9 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clp1Q99LI9 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Clp1Q99LI9 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clp1Q99LI9 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clp1Q99LI9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.51■□□□□ 0.23
Clp1Q99LI9 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clp1Q99LI9 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clp1Q99LI9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Clp1Q99LI9 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.51■□□□□ 0.23
Clp1Q99LI9 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Clp1Q99LI9 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.51■□□□□ 0.23
Clp1Q99LI9 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clp1Q99LI9 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.51■□□□□ 0.23
Clp1Q99LI9 Gm9385-201ENSMUST00000117563 472 ntBASIC16.51■□□□□ 0.23
Clp1Q99LI9 Gm16198-201ENSMUST00000118766 670 ntBASIC16.51■□□□□ 0.23
Clp1Q99LI9 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clp1Q99LI9 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.51■□□□□ 0.23
Clp1Q99LI9 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.51■□□□□ 0.23
Clp1Q99LI9 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clp1Q99LI9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Clp1Q99LI9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clp1Q99LI9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clp1Q99LI9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clp1Q99LI9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clp1Q99LI9 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clp1Q99LI9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clp1Q99LI9 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.5■□□□□ 0.23
Clp1Q99LI9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clp1Q99LI9 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Clp1Q99LI9 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.5■□□□□ 0.23
Clp1Q99LI9 Gm2272-201ENSMUST00000194903 582 ntBASIC16.5■□□□□ 0.23
Clp1Q99LI9 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Clp1Q99LI9 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clp1Q99LI9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clp1Q99LI9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clp1Q99LI9 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clp1Q99LI9 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.5■□□□□ 0.23
Clp1Q99LI9 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clp1Q99LI9 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clp1Q99LI9 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Clp1Q99LI9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Clp1Q99LI9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clp1Q99LI9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clp1Q99LI9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Clp1Q99LI9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clp1Q99LI9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Clp1Q99LI9 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clp1Q99LI9 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clp1Q99LI9 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clp1Q99LI9 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clp1Q99LI9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clp1Q99LI9 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Clp1Q99LI9 Gm18057-201ENSMUST00000208220 503 ntBASIC16.49■□□□□ 0.23
Clp1Q99LI9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clp1Q99LI9 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clp1Q99LI9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
Clp1Q99LI9 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clp1Q99LI9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.49■□□□□ 0.23
Clp1Q99LI9 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Clp1Q99LI9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clp1Q99LI9 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clp1Q99LI9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Clp1Q99LI9 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Clp1Q99LI9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clp1Q99LI9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Clp1Q99LI9 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clp1Q99LI9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clp1Q99LI9 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clp1Q99LI9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clp1Q99LI9 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms