Protein–RNA interactions for Protein: Q99J10

Ctu1, Cytoplasmic tRNA 2-thiolation protein 1, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctu1Q99J10 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ctu1Q99J10 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ctu1Q99J10 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.36■□□□□ 0.37
Ctu1Q99J10 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Ctu1Q99J10 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ctu1Q99J10 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
Ctu1Q99J10 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.35■□□□□ 0.37
Ctu1Q99J10 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ctu1Q99J10 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ctu1Q99J10 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ctu1Q99J10 Mir449b-201ENSMUST00000104833 80 ntBASIC17.35■□□□□ 0.37
Ctu1Q99J10 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ctu1Q99J10 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.35■□□□□ 0.37
Ctu1Q99J10 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ctu1Q99J10 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ctu1Q99J10 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.35■□□□□ 0.37
Ctu1Q99J10 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ctu1Q99J10 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.35■□□□□ 0.37
Ctu1Q99J10 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ctu1Q99J10 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ctu1Q99J10 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ctu1Q99J10 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.35■□□□□ 0.37
Ctu1Q99J10 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ctu1Q99J10 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.35■□□□□ 0.37
Ctu1Q99J10 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ctu1Q99J10 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ctu1Q99J10 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ctu1Q99J10 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ctu1Q99J10 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ctu1Q99J10 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Ctu1Q99J10 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ctu1Q99J10 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.35■□□□□ 0.37
Ctu1Q99J10 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.34■□□□□ 0.37
Ctu1Q99J10 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctu1Q99J10 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctu1Q99J10 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.34■□□□□ 0.37
Ctu1Q99J10 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctu1Q99J10 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ctu1Q99J10 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctu1Q99J10 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.34■□□□□ 0.37
Ctu1Q99J10 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctu1Q99J10 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ctu1Q99J10 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17.34■□□□□ 0.37
Ctu1Q99J10 Gm22175-201ENSMUST00000175007 78 ntBASIC17.34■□□□□ 0.37
Ctu1Q99J10 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.34■□□□□ 0.37
Ctu1Q99J10 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.34■□□□□ 0.37
Ctu1Q99J10 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.34■□□□□ 0.37
Ctu1Q99J10 Gm5186-201ENSMUST00000218781 920 ntBASIC17.34■□□□□ 0.37
Ctu1Q99J10 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ctu1Q99J10 Wdyhv1-206ENSMUST00000227142 786 ntBASIC17.34■□□□□ 0.37
Ctu1Q99J10 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctu1Q99J10 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctu1Q99J10 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ctu1Q99J10 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Ctu1Q99J10 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctu1Q99J10 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ctu1Q99J10 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctu1Q99J10 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.34■□□□□ 0.37
Ctu1Q99J10 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ctu1Q99J10 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctu1Q99J10 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctu1Q99J10 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctu1Q99J10 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ctu1Q99J10 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ctu1Q99J10 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.33■□□□□ 0.37
Ctu1Q99J10 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ctu1Q99J10 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ctu1Q99J10 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Ctu1Q99J10 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
Ctu1Q99J10 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ctu1Q99J10 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ctu1Q99J10 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ctu1Q99J10 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ctu1Q99J10 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ctu1Q99J10 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ctu1Q99J10 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ctu1Q99J10 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.33■□□□□ 0.36
Ctu1Q99J10 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctu1Q99J10 Gm8318-201ENSMUST00000182954 872 ntBASIC17.33■□□□□ 0.36
Ctu1Q99J10 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.33■□□□□ 0.36
Ctu1Q99J10 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctu1Q99J10 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctu1Q99J10 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Ctu1Q99J10 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctu1Q99J10 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctu1Q99J10 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ctu1Q99J10 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Ctu1Q99J10 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctu1Q99J10 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctu1Q99J10 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ctu1Q99J10 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctu1Q99J10 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctu1Q99J10 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctu1Q99J10 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctu1Q99J10 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ctu1Q99J10 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctu1Q99J10 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.32■□□□□ 0.36
Ctu1Q99J10 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ctu1Q99J10 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctu1Q99J10 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms