Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Dhx40Q6PE54 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Dhx40Q6PE54 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Dhx40Q6PE54 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Dhx40Q6PE54 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Dhx40Q6PE54 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Dhx40Q6PE54 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Dhx40Q6PE54 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Dhx40Q6PE54 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Dhx40Q6PE54 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Dhx40Q6PE54 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.47■□□□□ 0.39
Dhx40Q6PE54 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Dhx40Q6PE54 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Dhx40Q6PE54 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Dhx40Q6PE54 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Dhx40Q6PE54 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Dhx40Q6PE54 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Dhx40Q6PE54 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Dhx40Q6PE54 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Dhx40Q6PE54 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Dhx40Q6PE54 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Dhx40Q6PE54 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Dhx40Q6PE54 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Dhx40Q6PE54 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Dhx40Q6PE54 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Dhx40Q6PE54 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
Dhx40Q6PE54 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Dhx40Q6PE54 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Dhx40Q6PE54 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Dhx40Q6PE54 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Dhx40Q6PE54 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Dhx40Q6PE54 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Dhx40Q6PE54 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Dhx40Q6PE54 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Dhx40Q6PE54 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Dhx40Q6PE54 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.45■□□□□ 0.38
Dhx40Q6PE54 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.45■□□□□ 0.38
Dhx40Q6PE54 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.45■□□□□ 0.38
Dhx40Q6PE54 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.45■□□□□ 0.38
Dhx40Q6PE54 Gm21559-201ENSMUST00000220638 855 ntBASIC17.45■□□□□ 0.38
Dhx40Q6PE54 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.45■□□□□ 0.38
Dhx40Q6PE54 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Dhx40Q6PE54 Gm8587-201ENSMUST00000076538 843 ntBASIC17.45■□□□□ 0.38
Dhx40Q6PE54 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.45■□□□□ 0.38
Dhx40Q6PE54 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.45■□□□□ 0.38
Dhx40Q6PE54 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Dhx40Q6PE54 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Dhx40Q6PE54 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Dhx40Q6PE54 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Dhx40Q6PE54 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Dhx40Q6PE54 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Dhx40Q6PE54 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Dhx40Q6PE54 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Dhx40Q6PE54 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Dhx40Q6PE54 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Dhx40Q6PE54 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Dhx40Q6PE54 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Dhx40Q6PE54 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Dhx40Q6PE54 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Dhx40Q6PE54 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Dhx40Q6PE54 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Dhx40Q6PE54 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Dhx40Q6PE54 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Dhx40Q6PE54 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Dhx40Q6PE54 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Dhx40Q6PE54 Gm27389-201ENSMUST00000183622 195 ntBASIC17.44■□□□□ 0.38
Dhx40Q6PE54 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Dhx40Q6PE54 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Dhx40Q6PE54 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Dhx40Q6PE54 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Dhx40Q6PE54 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Dhx40Q6PE54 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Dhx40Q6PE54 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Dhx40Q6PE54 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Dhx40Q6PE54 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Dhx40Q6PE54 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.44■□□□□ 0.38
Dhx40Q6PE54 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Dhx40Q6PE54 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Dhx40Q6PE54 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Dhx40Q6PE54 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Dhx40Q6PE54 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Dhx40Q6PE54 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Dhx40Q6PE54 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.43■□□□□ 0.38
Dhx40Q6PE54 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Dhx40Q6PE54 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Dhx40Q6PE54 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.43■□□□□ 0.38
Dhx40Q6PE54 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Dhx40Q6PE54 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Dhx40Q6PE54 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Dhx40Q6PE54 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Dhx40Q6PE54 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.43■□□□□ 0.38
Dhx40Q6PE54 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Dhx40Q6PE54 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Dhx40Q6PE54 Gm22697-201ENSMUST00000175194 63 ntBASIC17.43■□□□□ 0.38
Dhx40Q6PE54 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Dhx40Q6PE54 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Dhx40Q6PE54 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Dhx40Q6PE54 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Dhx40Q6PE54 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Dhx40Q6PE54 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms