Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox17Q61473 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox17Q61473 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox17Q61473 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.78□□□□□ -0.04
Sox17Q61473 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.78□□□□□ -0.04
Sox17Q61473 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.78□□□□□ -0.04
Sox17Q61473 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox17Q61473 Odf3b-204ENSMUST00000227834 930 ntBASIC14.78□□□□□ -0.04
Sox17Q61473 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox17Q61473 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox17Q61473 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Sox17Q61473 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox17Q61473 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox17Q61473 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox17Q61473 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox17Q61473 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox17Q61473 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox17Q61473 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox17Q61473 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox17Q61473 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox17Q61473 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox17Q61473 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox17Q61473 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox17Q61473 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.77□□□□□ -0.04
Sox17Q61473 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox17Q61473 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Sox17Q61473 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox17Q61473 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Sox17Q61473 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox17Q61473 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox17Q61473 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.77□□□□□ -0.04
Sox17Q61473 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox17Q61473 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Sox17Q61473 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox17Q61473 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox17Q61473 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox17Q61473 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Sox17Q61473 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.77□□□□□ -0.05
Sox17Q61473 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.77□□□□□ -0.05
Sox17Q61473 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.77□□□□□ -0.05
Sox17Q61473 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
Sox17Q61473 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox17Q61473 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox17Q61473 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox17Q61473 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox17Q61473 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox17Q61473 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox17Q61473 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox17Q61473 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox17Q61473 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox17Q61473 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox17Q61473 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sox17Q61473 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox17Q61473 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.76□□□□□ -0.05
Sox17Q61473 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox17Q61473 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Sox17Q61473 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.76□□□□□ -0.05
Sox17Q61473 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.76□□□□□ -0.05
Sox17Q61473 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.76□□□□□ -0.05
Sox17Q61473 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox17Q61473 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sox17Q61473 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.76□□□□□ -0.05
Sox17Q61473 Gm715-201ENSMUST00000117865 831 ntBASIC14.76□□□□□ -0.05
Sox17Q61473 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.76□□□□□ -0.05
Sox17Q61473 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.76□□□□□ -0.05
Sox17Q61473 Gm29707-201ENSMUST00000196325 491 ntBASIC14.76□□□□□ -0.05
Sox17Q61473 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox17Q61473 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Sox17Q61473 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sox17Q61473 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Sox17Q61473 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox17Q61473 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox17Q61473 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox17Q61473 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sox17Q61473 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox17Q61473 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.76□□□□□ -0.05
Sox17Q61473 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox17Q61473 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox17Q61473 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.76□□□□□ -0.05
Sox17Q61473 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Sox17Q61473 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox17Q61473 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox17Q61473 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.75□□□□□ -0.05
Sox17Q61473 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox17Q61473 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox17Q61473 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.75□□□□□ -0.05
Sox17Q61473 Gm15039-201ENSMUST00000118914 875 ntBASIC14.75□□□□□ -0.05
Sox17Q61473 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.75□□□□□ -0.05
Sox17Q61473 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC14.75□□□□□ -0.05
Sox17Q61473 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Sox17Q61473 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox17Q61473 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox17Q61473 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Sox17Q61473 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox17Q61473 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox17Q61473 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Sox17Q61473 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox17Q61473 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox17Q61473 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox17Q61473 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms