Protein–RNA interactions for Protein: Q61467

Zic4, Zinc finger protein ZIC 4, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic4Q61467 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Zic4Q61467 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.75□□□□□ -0.37
Zic4Q61467 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Zic4Q61467 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.75□□□□□ -0.37
Zic4Q61467 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Zic4Q61467 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Zic4Q61467 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Zic4Q61467 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
Zic4Q61467 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Zic4Q61467 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Zic4Q61467 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Zic4Q61467 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Zic4Q61467 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Zic4Q61467 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zic4Q61467 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Zic4Q61467 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC12.74□□□□□ -0.37
Zic4Q61467 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zic4Q61467 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Zic4Q61467 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Zic4Q61467 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zic4Q61467 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.74□□□□□ -0.37
Zic4Q61467 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.74□□□□□ -0.37
Zic4Q61467 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.74□□□□□ -0.37
Zic4Q61467 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC12.74□□□□□ -0.37
Zic4Q61467 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.74□□□□□ -0.37
Zic4Q61467 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zic4Q61467 Gm10566-201ENSMUST00000086739 996 ntBASIC12.74□□□□□ -0.37
Zic4Q61467 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zic4Q61467 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Zic4Q61467 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zic4Q61467 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Zic4Q61467 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Zic4Q61467 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zic4Q61467 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Zic4Q61467 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.73□□□□□ -0.37
Zic4Q61467 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Zic4Q61467 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Zic4Q61467 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zic4Q61467 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Zic4Q61467 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zic4Q61467 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zic4Q61467 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Zic4Q61467 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Zic4Q61467 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zic4Q61467 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Zic4Q61467 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zic4Q61467 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zic4Q61467 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zic4Q61467 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Zic4Q61467 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zic4Q61467 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zic4Q61467 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.73□□□□□ -0.37
Zic4Q61467 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zic4Q61467 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Zic4Q61467 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zic4Q61467 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Zic4Q61467 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Zic4Q61467 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zic4Q61467 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zic4Q61467 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zic4Q61467 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Zic4Q61467 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zic4Q61467 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zic4Q61467 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Zic4Q61467 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Zic4Q61467 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zic4Q61467 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zic4Q61467 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zic4Q61467 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zic4Q61467 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Zic4Q61467 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zic4Q61467 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.72□□□□□ -0.37
Zic4Q61467 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC12.72□□□□□ -0.37
Zic4Q61467 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Zic4Q61467 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC12.72□□□□□ -0.37
Zic4Q61467 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.72□□□□□ -0.37
Zic4Q61467 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zic4Q61467 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Zic4Q61467 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zic4Q61467 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zic4Q61467 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Zic4Q61467 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zic4Q61467 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zic4Q61467 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zic4Q61467 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.72□□□□□ -0.37
Zic4Q61467 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zic4Q61467 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Zic4Q61467 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zic4Q61467 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zic4Q61467 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.72□□□□□ -0.37
Zic4Q61467 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Zic4Q61467 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zic4Q61467 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Zic4Q61467 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zic4Q61467 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.72□□□□□ -0.37
Zic4Q61467 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.72□□□□□ -0.37
Zic4Q61467 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zic4Q61467 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Zic4Q61467 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.71□□□□□ -0.37
Zic4Q61467 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms