Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3-3Q5R1C3 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3-3Q5R1C3 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav3-3Q5R1C3 Rubie-203ENSMUST00000227803 2430 ntBASIC11.85□□□□□ -0.51
Trav3-3Q5R1C3 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav3-3Q5R1C3 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3-3Q5R1C3 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3-3Q5R1C3 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 Gm13148-201ENSMUST00000118892 745 ntBASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 AC107711.5-202ENSMUST00000226429 702 ntBASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-3Q5R1C3 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav3-3Q5R1C3 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav3-3Q5R1C3 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav3-3Q5R1C3 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-3Q5R1C3 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-3Q5R1C3 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-3Q5R1C3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-3Q5R1C3 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav3-3Q5R1C3 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-3Q5R1C3 Gm15375-201ENSMUST00000119510 849 ntBASIC11.83□□□□□ -0.52
Trav3-3Q5R1C3 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC11.83□□□□□ -0.52
Trav3-3Q5R1C3 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-3Q5R1C3 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC11.83□□□□□ -0.52
Trav3-3Q5R1C3 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-3Q5R1C3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-3Q5R1C3 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-3Q5R1C3 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav3-3Q5R1C3 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-3Q5R1C3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav3-3Q5R1C3 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav3-3Q5R1C3 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-3Q5R1C3 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-3Q5R1C3 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-3Q5R1C3 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-3Q5R1C3 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav3-3Q5R1C3 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC11.83□□□□□ -0.52
Trav3-3Q5R1C3 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-3Q5R1C3 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-3Q5R1C3 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-3Q5R1C3 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-3Q5R1C3 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-3Q5R1C3 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-3Q5R1C3 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav3-3Q5R1C3 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-3Q5R1C3 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-3Q5R1C3 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-3Q5R1C3 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-3Q5R1C3 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-3Q5R1C3 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Trav3-3Q5R1C3 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-3Q5R1C3 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav3-3Q5R1C3 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-3Q5R1C3 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav3-3Q5R1C3 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-3Q5R1C3 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-3Q5R1C3 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-3Q5R1C3 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-3Q5R1C3 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Trav3-3Q5R1C3 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-3Q5R1C3 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-3Q5R1C3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav3-3Q5R1C3 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-3Q5R1C3 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-3Q5R1C3 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms