Protein–RNA interactions for Protein: Q0PD08

Rab42, Ras-related protein Rab-42, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab42Q0PD08 Gm12134-201ENSMUST00000122109 520 ntBASIC13.94□□□□□ -0.18
Rab42Q0PD08 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.94□□□□□ -0.18
Rab42Q0PD08 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rab42Q0PD08 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Rab42Q0PD08 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Rab42Q0PD08 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC13.94□□□□□ -0.18
Rab42Q0PD08 Gm37055-201ENSMUST00000191866 133 ntBASIC13.94□□□□□ -0.18
Rab42Q0PD08 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rab42Q0PD08 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Rab42Q0PD08 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rab42Q0PD08 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rab42Q0PD08 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rab42Q0PD08 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Rab42Q0PD08 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rab42Q0PD08 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rab42Q0PD08 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rab42Q0PD08 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rab42Q0PD08 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rab42Q0PD08 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Rab42Q0PD08 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rab42Q0PD08 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rab42Q0PD08 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rab42Q0PD08 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rab42Q0PD08 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rab42Q0PD08 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rab42Q0PD08 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rab42Q0PD08 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rab42Q0PD08 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rab42Q0PD08 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rab42Q0PD08 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rab42Q0PD08 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rab42Q0PD08 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rab42Q0PD08 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.93□□□□□ -0.18
Rab42Q0PD08 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rab42Q0PD08 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rab42Q0PD08 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Rab42Q0PD08 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.93□□□□□ -0.18
Rab42Q0PD08 Gm30025-201ENSMUST00000218555 728 ntBASIC13.93□□□□□ -0.18
Rab42Q0PD08 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rab42Q0PD08 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Rab42Q0PD08 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rab42Q0PD08 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rab42Q0PD08 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rab42Q0PD08 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rab42Q0PD08 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rab42Q0PD08 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rab42Q0PD08 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rab42Q0PD08 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rab42Q0PD08 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rab42Q0PD08 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rab42Q0PD08 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rab42Q0PD08 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rab42Q0PD08 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rab42Q0PD08 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.93□□□□□ -0.18
Rab42Q0PD08 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rab42Q0PD08 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Rab42Q0PD08 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rab42Q0PD08 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rab42Q0PD08 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rab42Q0PD08 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rab42Q0PD08 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Rab42Q0PD08 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Rab42Q0PD08 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rab42Q0PD08 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rab42Q0PD08 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rab42Q0PD08 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.92□□□□□ -0.18
Rab42Q0PD08 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rab42Q0PD08 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rab42Q0PD08 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.92□□□□□ -0.18
Rab42Q0PD08 AL672049.1-201ENSMUST00000197943 91 ntBASIC13.92□□□□□ -0.18
Rab42Q0PD08 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.92□□□□□ -0.18
Rab42Q0PD08 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.92□□□□□ -0.18
Rab42Q0PD08 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rab42Q0PD08 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rab42Q0PD08 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Rab42Q0PD08 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rab42Q0PD08 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rab42Q0PD08 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rab42Q0PD08 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rab42Q0PD08 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
Rab42Q0PD08 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rab42Q0PD08 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rab42Q0PD08 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.92□□□□□ -0.18
Rab42Q0PD08 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rab42Q0PD08 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.92□□□□□ -0.18
Rab42Q0PD08 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rab42Q0PD08 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rab42Q0PD08 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Rab42Q0PD08 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Rab42Q0PD08 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rab42Q0PD08 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Rab42Q0PD08 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rab42Q0PD08 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rab42Q0PD08 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rab42Q0PD08 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rab42Q0PD08 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rab42Q0PD08 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.91□□□□□ -0.18
Rab42Q0PD08 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rab42Q0PD08 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rab42Q0PD08 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms