Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh6P97326 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.92■□□□□ 0.14
Cdh6P97326 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Cdh6P97326 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh6P97326 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh6P97326 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh6P97326 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh6P97326 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.92■□□□□ 0.14
Cdh6P97326 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh6P97326 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh6P97326 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.92■□□□□ 0.14
Cdh6P97326 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh6P97326 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh6P97326 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh6P97326 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh6P97326 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh6P97326 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh6P97326 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.91■□□□□ 0.14
Cdh6P97326 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.91■□□□□ 0.14
Cdh6P97326 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh6P97326 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh6P97326 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh6P97326 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh6P97326 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh6P97326 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Cdh6P97326 Gm8344-201ENSMUST00000119813 856 ntBASIC15.91■□□□□ 0.14
Cdh6P97326 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh6P97326 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh6P97326 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Cdh6P97326 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh6P97326 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh6P97326 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh6P97326 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Cdh6P97326 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh6P97326 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh6P97326 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh6P97326 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh6P97326 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh6P97326 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh6P97326 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh6P97326 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh6P97326 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh6P97326 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh6P97326 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Cdh6P97326 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh6P97326 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.9■□□□□ 0.14
Cdh6P97326 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh6P97326 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh6P97326 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh6P97326 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.9■□□□□ 0.14
Cdh6P97326 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.9■□□□□ 0.14
Cdh6P97326 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.9■□□□□ 0.14
Cdh6P97326 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.9■□□□□ 0.14
Cdh6P97326 Gm19164-201ENSMUST00000210667 640 ntBASIC15.9■□□□□ 0.14
Cdh6P97326 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh6P97326 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh6P97326 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.9■□□□□ 0.14
Cdh6P97326 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh6P97326 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh6P97326 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh6P97326 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Cdh6P97326 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh6P97326 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh6P97326 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh6P97326 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh6P97326 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh6P97326 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh6P97326 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Cdh6P97326 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Cdh6P97326 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh6P97326 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Cdh6P97326 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh6P97326 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh6P97326 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.89■□□□□ 0.13
Cdh6P97326 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Cdh6P97326 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh6P97326 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh6P97326 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh6P97326 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Cdh6P97326 Prob1-201ENSMUST00000097619 3021 ntBASIC15.89■□□□□ 0.13
Cdh6P97326 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh6P97326 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh6P97326 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.88■□□□□ 0.13
Cdh6P97326 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Cdh6P97326 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh6P97326 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh6P97326 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh6P97326 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh6P97326 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Cdh6P97326 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh6P97326 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.88■□□□□ 0.13
Cdh6P97326 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh6P97326 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh6P97326 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh6P97326 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh6P97326 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh6P97326 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.88■□□□□ 0.13
Cdh6P97326 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh6P97326 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh6P97326 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms