Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
Hmx3P42581 Odf3b-204ENSMUST00000227834 930 ntBASIC13.16□□□□□ -0.3
Hmx3P42581 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmx3P42581 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hmx3P42581 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmx3P42581 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Hmx3P42581 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.16□□□□□ -0.3
Hmx3P42581 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmx3P42581 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.16□□□□□ -0.3
Hmx3P42581 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Hmx3P42581 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmx3P42581 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmx3P42581 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmx3P42581 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hmx3P42581 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmx3P42581 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmx3P42581 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmx3P42581 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmx3P42581 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmx3P42581 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmx3P42581 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmx3P42581 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Hmx3P42581 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Hmx3P42581 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hmx3P42581 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC13.15□□□□□ -0.3
Hmx3P42581 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmx3P42581 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.15□□□□□ -0.3
Hmx3P42581 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC13.15□□□□□ -0.3
Hmx3P42581 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmx3P42581 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmx3P42581 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmx3P42581 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Hmx3P42581 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmx3P42581 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmx3P42581 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmx3P42581 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.15□□□□□ -0.3
Hmx3P42581 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
Hmx3P42581 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmx3P42581 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.14□□□□□ -0.31
Hmx3P42581 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmx3P42581 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Hmx3P42581 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Hmx3P42581 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmx3P42581 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmx3P42581 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmx3P42581 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hmx3P42581 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmx3P42581 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmx3P42581 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmx3P42581 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.14□□□□□ -0.31
Hmx3P42581 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmx3P42581 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
Hmx3P42581 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmx3P42581 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmx3P42581 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hmx3P42581 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.14□□□□□ -0.31
Hmx3P42581 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmx3P42581 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmx3P42581 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC13.14□□□□□ -0.31
Hmx3P42581 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Hmx3P42581 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC13.14□□□□□ -0.31
Hmx3P42581 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmx3P42581 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmx3P42581 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmx3P42581 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.14□□□□□ -0.31
Hmx3P42581 Sybu-209ENSMUST00000228639 4113 ntBASIC13.14□□□□□ -0.31
Hmx3P42581 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmx3P42581 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmx3P42581 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.14□□□□□ -0.31
Hmx3P42581 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmx3P42581 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmx3P42581 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.14□□□□□ -0.31
Hmx3P42581 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmx3P42581 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hmx3P42581 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hmx3P42581 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmx3P42581 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmx3P42581 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmx3P42581 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmx3P42581 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.13□□□□□ -0.31
Hmx3P42581 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmx3P42581 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmx3P42581 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmx3P42581 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmx3P42581 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Hmx3P42581 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hmx3P42581 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmx3P42581 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmx3P42581 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hmx3P42581 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmx3P42581 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hmx3P42581 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hmx3P42581 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmx3P42581 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmx3P42581 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmx3P42581 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmx3P42581 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hmx3P42581 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmx3P42581 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmx3P42581 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms