Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PDE6BP35913 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PDE6BP35913 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PDE6BP35913 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
PDE6BP35913 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PDE6BP35913 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC22.85■■□□□ 1.25
PDE6BP35913 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PDE6BP35913 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PDE6BP35913 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC22.85■■□□□ 1.25
PDE6BP35913 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PDE6BP35913 FP475955.4-201ENST00000623131 1990 ntBASIC22.85■■□□□ 1.25
PDE6BP35913 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PDE6BP35913 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC22.85■■□□□ 1.25
PDE6BP35913 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PDE6BP35913 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
PDE6BP35913 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PDE6BP35913 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC22.85■■□□□ 1.25
PDE6BP35913 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PDE6BP35913 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PDE6BP35913 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PDE6BP35913 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PDE6BP35913 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PDE6BP35913 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PDE6BP35913 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
PDE6BP35913 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PDE6BP35913 RPS2P28-201ENST00000314255 741 ntBASIC22.84■■□□□ 1.25
PDE6BP35913 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
PDE6BP35913 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PDE6BP35913 RCN1P2-201ENST00000398357 915 ntBASIC22.84■■□□□ 1.25
PDE6BP35913 RBM17P3-201ENST00000417687 1192 ntBASIC22.84■■□□□ 1.25
PDE6BP35913 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC22.84■■□□□ 1.25
PDE6BP35913 FGFR3P6-201ENST00000457012 610 ntBASIC22.84■■□□□ 1.25
PDE6BP35913 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC22.84■■□□□ 1.25
PDE6BP35913 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC22.84■■□□□ 1.25
PDE6BP35913 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC22.84■■□□□ 1.25
PDE6BP35913 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC22.84■■□□□ 1.25
PDE6BP35913 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PDE6BP35913 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC22.84■■□□□ 1.25
PDE6BP35913 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
PDE6BP35913 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC22.84■■□□□ 1.25
PDE6BP35913 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PDE6BP35913 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PDE6BP35913 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PDE6BP35913 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PDE6BP35913 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PDE6BP35913 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC22.83■■□□□ 1.25
PDE6BP35913 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PDE6BP35913 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PDE6BP35913 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PDE6BP35913 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PDE6BP35913 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PDE6BP35913 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC22.83■■□□□ 1.25
PDE6BP35913 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC22.83■■□□□ 1.25
PDE6BP35913 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC22.83■■□□□ 1.25
PDE6BP35913 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
PDE6BP35913 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PDE6BP35913 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC22.83■■□□□ 1.25
PDE6BP35913 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
PDE6BP35913 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
PDE6BP35913 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.24
PDE6BP35913 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PDE6BP35913 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.82■■□□□ 1.24
PDE6BP35913 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PDE6BP35913 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC22.82■■□□□ 1.24
PDE6BP35913 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PDE6BP35913 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PDE6BP35913 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC22.82■■□□□ 1.24
PDE6BP35913 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PDE6BP35913 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PDE6BP35913 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC22.82■■□□□ 1.24
PDE6BP35913 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC22.82■■□□□ 1.24
PDE6BP35913 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC22.82■■□□□ 1.24
PDE6BP35913 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC22.82■■□□□ 1.24
PDE6BP35913 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC22.82■■□□□ 1.24
PDE6BP35913 MTDHP3-201ENST00000594186 672 ntBASIC22.82■■□□□ 1.24
PDE6BP35913 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PDE6BP35913 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PDE6BP35913 AC116407.3-201ENST00000623905 1129 ntBASIC22.82■■□□□ 1.24
PDE6BP35913 CAND2-206ENST00000626378 333 ntTSL 5 BASIC22.82■■□□□ 1.24
PDE6BP35913 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC22.82■■□□□ 1.24
PDE6BP35913 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC22.82■■□□□ 1.24
PDE6BP35913 AL357033.4-201ENST00000617703 1807 ntBASIC22.82■■□□□ 1.24
PDE6BP35913 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.81■■□□□ 1.24
PDE6BP35913 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
PDE6BP35913 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PDE6BP35913 TP73-AS1-210ENST00000637775 1455 ntBASIC22.81■■□□□ 1.24
PDE6BP35913 PAN3-AS1-201ENST00000563843 1351 ntBASIC22.81■■□□□ 1.24
PDE6BP35913 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.81■■□□□ 1.24
PDE6BP35913 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PDE6BP35913 HNRNPDP1-201ENST00000439535 754 ntBASIC22.81■■□□□ 1.24
PDE6BP35913 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC22.81■■□□□ 1.24
PDE6BP35913 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PDE6BP35913 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC22.81■■□□□ 1.24
PDE6BP35913 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC22.81■■□□□ 1.24
PDE6BP35913 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
PDE6BP35913 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC22.81■■□□□ 1.24
PDE6BP35913 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC22.81■■□□□ 1.24
PDE6BP35913 AL163051.1-201ENST00000569214 1512 ntBASIC22.81■■□□□ 1.24
PDE6BP35913 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC22.81■■□□□ 1.24
PDE6BP35913 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms