Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rab5cP35278 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rab5cP35278 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.85□□□□□ -0.35
Rab5cP35278 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rab5cP35278 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rab5cP35278 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rab5cP35278 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rab5cP35278 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rab5cP35278 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Rab5cP35278 Actl10-202ENSMUST00000226583 1501 ntBASIC12.85□□□□□ -0.35
Rab5cP35278 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rab5cP35278 Gm6211-202ENSMUST00000167849 925 ntBASIC12.85□□□□□ -0.35
Rab5cP35278 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC12.85□□□□□ -0.35
Rab5cP35278 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rab5cP35278 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Rab5cP35278 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rab5cP35278 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Rab5cP35278 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rab5cP35278 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.85□□□□□ -0.35
Rab5cP35278 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rab5cP35278 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.85□□□□□ -0.35
Rab5cP35278 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rab5cP35278 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rab5cP35278 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rab5cP35278 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rab5cP35278 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rab5cP35278 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.84□□□□□ -0.35
Rab5cP35278 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rab5cP35278 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rab5cP35278 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.84□□□□□ -0.35
Rab5cP35278 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.84□□□□□ -0.35
Rab5cP35278 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rab5cP35278 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rab5cP35278 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rab5cP35278 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rab5cP35278 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rab5cP35278 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rab5cP35278 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rab5cP35278 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Rab5cP35278 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rab5cP35278 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rab5cP35278 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rab5cP35278 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rab5cP35278 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC12.84□□□□□ -0.35
Rab5cP35278 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rab5cP35278 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rab5cP35278 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rab5cP35278 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rab5cP35278 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.84□□□□□ -0.35
Rab5cP35278 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC12.84□□□□□ -0.35
Rab5cP35278 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rab5cP35278 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rab5cP35278 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.84□□□□□ -0.35
Rab5cP35278 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rab5cP35278 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rab5cP35278 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rab5cP35278 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rab5cP35278 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rab5cP35278 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rab5cP35278 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.84□□□□□ -0.35
Rab5cP35278 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rab5cP35278 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Rab5cP35278 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.35
Rab5cP35278 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.83□□□□□ -0.35
Rab5cP35278 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.83□□□□□ -0.35
Rab5cP35278 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Rab5cP35278 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rab5cP35278 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Rab5cP35278 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.83□□□□□ -0.36
Rab5cP35278 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rab5cP35278 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Rab5cP35278 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Rab5cP35278 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rab5cP35278 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rab5cP35278 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rab5cP35278 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.83□□□□□ -0.36
Rab5cP35278 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Rab5cP35278 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rab5cP35278 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC12.83□□□□□ -0.36
Rab5cP35278 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Rab5cP35278 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rab5cP35278 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.83□□□□□ -0.36
Rab5cP35278 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.83□□□□□ -0.36
Rab5cP35278 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rab5cP35278 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rab5cP35278 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Rab5cP35278 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rab5cP35278 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rab5cP35278 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rab5cP35278 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Rab5cP35278 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rab5cP35278 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12.83□□□□□ -0.36
Rab5cP35278 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rab5cP35278 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rab5cP35278 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Rab5cP35278 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Rab5cP35278 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rab5cP35278 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
Rab5cP35278 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab5cP35278 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms