Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prom1O54990 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.26■□□□□ 0.35
Prom1O54990 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prom1O54990 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prom1O54990 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prom1O54990 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prom1O54990 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prom1O54990 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Prom1O54990 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Prom1O54990 Gm15427-201ENSMUST00000117288 531 ntBASIC17.26■□□□□ 0.35
Prom1O54990 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.26■□□□□ 0.35
Prom1O54990 Gm11745-201ENSMUST00000121669 448 ntBASIC17.26■□□□□ 0.35
Prom1O54990 Gm27494-201ENSMUST00000184735 189 ntBASIC17.26■□□□□ 0.35
Prom1O54990 Gm44335-201ENSMUST00000196879 141 ntBASIC17.26■□□□□ 0.35
Prom1O54990 Gm44297-201ENSMUST00000198304 141 ntBASIC17.26■□□□□ 0.35
Prom1O54990 Gm44346-201ENSMUST00000198851 141 ntBASIC17.26■□□□□ 0.35
Prom1O54990 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.26■□□□□ 0.35
Prom1O54990 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prom1O54990 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.26■□□□□ 0.35
Prom1O54990 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prom1O54990 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prom1O54990 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prom1O54990 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prom1O54990 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prom1O54990 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.26■□□□□ 0.35
Prom1O54990 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prom1O54990 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prom1O54990 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prom1O54990 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prom1O54990 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prom1O54990 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prom1O54990 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prom1O54990 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Prom1O54990 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prom1O54990 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prom1O54990 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Prom1O54990 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prom1O54990 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prom1O54990 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.25■□□□□ 0.35
Prom1O54990 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prom1O54990 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prom1O54990 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prom1O54990 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prom1O54990 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prom1O54990 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prom1O54990 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prom1O54990 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prom1O54990 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prom1O54990 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prom1O54990 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Prom1O54990 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prom1O54990 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Prom1O54990 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prom1O54990 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prom1O54990 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prom1O54990 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prom1O54990 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Prom1O54990 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prom1O54990 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Prom1O54990 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Prom1O54990 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prom1O54990 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Prom1O54990 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prom1O54990 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prom1O54990 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prom1O54990 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prom1O54990 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prom1O54990 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prom1O54990 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.24■□□□□ 0.35
Prom1O54990 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prom1O54990 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.24■□□□□ 0.35
Prom1O54990 Gm7063-201ENSMUST00000186840 981 ntBASIC17.24■□□□□ 0.35
Prom1O54990 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.24■□□□□ 0.35
Prom1O54990 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.24■□□□□ 0.35
Prom1O54990 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prom1O54990 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prom1O54990 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prom1O54990 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prom1O54990 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prom1O54990 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prom1O54990 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prom1O54990 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Prom1O54990 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Prom1O54990 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Prom1O54990 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prom1O54990 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prom1O54990 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prom1O54990 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prom1O54990 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prom1O54990 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prom1O54990 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Prom1O54990 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Prom1O54990 Gm9385-201ENSMUST00000117563 472 ntBASIC17.23■□□□□ 0.35
Prom1O54990 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Prom1O54990 Mir6956-201ENSMUST00000183598 62 ntBASIC17.23■□□□□ 0.35
Prom1O54990 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prom1O54990 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prom1O54990 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prom1O54990 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prom1O54990 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms