Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccnb1ip1D3Z3K2 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccnb1ip1D3Z3K2 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccnb1ip1D3Z3K2 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.27□□□□□ -0.13
Ccnb1ip1D3Z3K2 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.27□□□□□ -0.13
Ccnb1ip1D3Z3K2 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccnb1ip1D3Z3K2 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccnb1ip1D3Z3K2 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccnb1ip1D3Z3K2 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccnb1ip1D3Z3K2 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccnb1ip1D3Z3K2 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ccnb1ip1D3Z3K2 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccnb1ip1D3Z3K2 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ccnb1ip1D3Z3K2 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccnb1ip1D3Z3K2 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccnb1ip1D3Z3K2 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccnb1ip1D3Z3K2 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.26□□□□□ -0.13
Ccnb1ip1D3Z3K2 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccnb1ip1D3Z3K2 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccnb1ip1D3Z3K2 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccnb1ip1D3Z3K2 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccnb1ip1D3Z3K2 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Ccnb1ip1D3Z3K2 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccnb1ip1D3Z3K2 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ccnb1ip1D3Z3K2 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccnb1ip1D3Z3K2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ccnb1ip1D3Z3K2 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.26□□□□□ -0.13
Ccnb1ip1D3Z3K2 Gm26524-201ENSMUST00000192339 390 ntBASIC14.26□□□□□ -0.13
Ccnb1ip1D3Z3K2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.26□□□□□ -0.13
Ccnb1ip1D3Z3K2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccnb1ip1D3Z3K2 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccnb1ip1D3Z3K2 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ccnb1ip1D3Z3K2 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccnb1ip1D3Z3K2 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccnb1ip1D3Z3K2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccnb1ip1D3Z3K2 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccnb1ip1D3Z3K2 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccnb1ip1D3Z3K2 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccnb1ip1D3Z3K2 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccnb1ip1D3Z3K2 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccnb1ip1D3Z3K2 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ccnb1ip1D3Z3K2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.25□□□□□ -0.13
Ccnb1ip1D3Z3K2 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccnb1ip1D3Z3K2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ccnb1ip1D3Z3K2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccnb1ip1D3Z3K2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.25□□□□□ -0.13
Ccnb1ip1D3Z3K2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.25□□□□□ -0.13
Ccnb1ip1D3Z3K2 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccnb1ip1D3Z3K2 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Ccnb1ip1D3Z3K2 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.25□□□□□ -0.13
Ccnb1ip1D3Z3K2 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccnb1ip1D3Z3K2 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccnb1ip1D3Z3K2 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccnb1ip1D3Z3K2 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccnb1ip1D3Z3K2 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccnb1ip1D3Z3K2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccnb1ip1D3Z3K2 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccnb1ip1D3Z3K2 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccnb1ip1D3Z3K2 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccnb1ip1D3Z3K2 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccnb1ip1D3Z3K2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccnb1ip1D3Z3K2 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Ccnb1ip1D3Z3K2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccnb1ip1D3Z3K2 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Ccnb1ip1D3Z3K2 Rab3c-203ENSMUST00000224180 967 ntBASIC14.24□□□□□ -0.13
Ccnb1ip1D3Z3K2 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccnb1ip1D3Z3K2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Ccnb1ip1D3Z3K2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ccnb1ip1D3Z3K2 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccnb1ip1D3Z3K2 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccnb1ip1D3Z3K2 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccnb1ip1D3Z3K2 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccnb1ip1D3Z3K2 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccnb1ip1D3Z3K2 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ccnb1ip1D3Z3K2 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccnb1ip1D3Z3K2 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.24□□□□□ -0.13
Ccnb1ip1D3Z3K2 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccnb1ip1D3Z3K2 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccnb1ip1D3Z3K2 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccnb1ip1D3Z3K2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccnb1ip1D3Z3K2 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccnb1ip1D3Z3K2 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccnb1ip1D3Z3K2 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccnb1ip1D3Z3K2 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccnb1ip1D3Z3K2 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccnb1ip1D3Z3K2 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.23□□□□□ -0.13
Ccnb1ip1D3Z3K2 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ccnb1ip1D3Z3K2 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.23□□□□□ -0.13
Ccnb1ip1D3Z3K2 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccnb1ip1D3Z3K2 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
Ccnb1ip1D3Z3K2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccnb1ip1D3Z3K2 Gm12382-201ENSMUST00000122005 922 ntBASIC14.23□□□□□ -0.13
Ccnb1ip1D3Z3K2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC14.23□□□□□ -0.13
Ccnb1ip1D3Z3K2 Gm18025-201ENSMUST00000221733 862 ntBASIC14.23□□□□□ -0.13
Ccnb1ip1D3Z3K2 Gm4968-201ENSMUST00000071458 858 ntBASIC14.23□□□□□ -0.13
Ccnb1ip1D3Z3K2 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccnb1ip1D3Z3K2 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccnb1ip1D3Z3K2 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccnb1ip1D3Z3K2 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccnb1ip1D3Z3K2 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms