Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC10.85□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC10.85□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Gm29707-201ENSMUST00000196325 491 ntBASIC10.85□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Pcgf5-211ENSMUST00000225920 6443 ntBASIC10.84□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13d-4A0A0G2JFX3 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13d-4A0A0G2JFX3 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Gm9867-201ENSMUST00000192212 2647 ntBASIC10.84□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Rbfox2-206ENSMUST00000227314 1810 ntBASIC10.84□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Asic1-205ENSMUST00000228185 1818 ntBASIC10.82□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms