Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 AC164629.5-201ENSMUST00000220387 632 ntBASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.27□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-3A0A0B4J1H2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC12.27□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.27□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.27□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.27□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Gm38027-201ENSMUST00000192315 235 ntBASIC12.27□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC12.27□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-3A0A0B4J1H2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC12.27□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.27□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Slc35b2-207ENSMUST00000226086 850 ntBASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms