Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp4bQ9D8B3 Gm10293-201ENSMUST00000076317 1002 ntBASIC19.82■□□□□ 0.76
Chmp4bQ9D8B3 Gm6316-201ENSMUST00000082064 1020 ntBASIC19.82■□□□□ 0.76
Chmp4bQ9D8B3 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp4bQ9D8B3 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp4bQ9D8B3 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp4bQ9D8B3 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp4bQ9D8B3 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC19.82■□□□□ 0.76
Chmp4bQ9D8B3 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp4bQ9D8B3 Wnt10b-206ENSMUST00000228546 2709 ntBASIC19.82■□□□□ 0.76
Chmp4bQ9D8B3 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Chmp4bQ9D8B3 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp4bQ9D8B3 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp4bQ9D8B3 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Chmp4bQ9D8B3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.81■□□□□ 0.76
Chmp4bQ9D8B3 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.81■□□□□ 0.76
Chmp4bQ9D8B3 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp4bQ9D8B3 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp4bQ9D8B3 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp4bQ9D8B3 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp4bQ9D8B3 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp4bQ9D8B3 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp4bQ9D8B3 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp4bQ9D8B3 Ccdc166-201ENSMUST00000182172 2584 ntBASIC19.81■□□□□ 0.76
Chmp4bQ9D8B3 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp4bQ9D8B3 AC133083.1-201ENSMUST00000221736 2209 ntBASIC19.8■□□□□ 0.76
Chmp4bQ9D8B3 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp4bQ9D8B3 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp4bQ9D8B3 Gm27528-202ENSMUST00000222916 2012 ntBASIC19.8■□□□□ 0.76
Chmp4bQ9D8B3 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Chmp4bQ9D8B3 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp4bQ9D8B3 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp4bQ9D8B3 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.8■□□□□ 0.76
Chmp4bQ9D8B3 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.8■□□□□ 0.76
Chmp4bQ9D8B3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp4bQ9D8B3 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp4bQ9D8B3 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp4bQ9D8B3 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp4bQ9D8B3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp4bQ9D8B3 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp4bQ9D8B3 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp4bQ9D8B3 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp4bQ9D8B3 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp4bQ9D8B3 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp4bQ9D8B3 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp4bQ9D8B3 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp4bQ9D8B3 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp4bQ9D8B3 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC19.79■□□□□ 0.76
Chmp4bQ9D8B3 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Chmp4bQ9D8B3 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC19.79■□□□□ 0.76
Chmp4bQ9D8B3 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Chmp4bQ9D8B3 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Chmp4bQ9D8B3 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp4bQ9D8B3 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp4bQ9D8B3 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp4bQ9D8B3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp4bQ9D8B3 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp4bQ9D8B3 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Chmp4bQ9D8B3 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp4bQ9D8B3 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp4bQ9D8B3 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp4bQ9D8B3 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC19.79■□□□□ 0.76
Chmp4bQ9D8B3 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp4bQ9D8B3 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp4bQ9D8B3 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp4bQ9D8B3 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp4bQ9D8B3 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp4bQ9D8B3 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp4bQ9D8B3 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp4bQ9D8B3 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Chmp4bQ9D8B3 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp4bQ9D8B3 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp4bQ9D8B3 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp4bQ9D8B3 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp4bQ9D8B3 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC19.78■□□□□ 0.76
Chmp4bQ9D8B3 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.78■□□□□ 0.76
Chmp4bQ9D8B3 AC124569.2-201ENSMUST00000225998 818 ntBASIC19.78■□□□□ 0.76
Chmp4bQ9D8B3 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp4bQ9D8B3 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp4bQ9D8B3 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp4bQ9D8B3 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC19.78■□□□□ 0.76
Chmp4bQ9D8B3 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC19.78■□□□□ 0.76
Chmp4bQ9D8B3 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Chmp4bQ9D8B3 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC19.78■□□□□ 0.76
Chmp4bQ9D8B3 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp4bQ9D8B3 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp4bQ9D8B3 Gm8784-201ENSMUST00000222096 1435 ntBASIC19.77■□□□□ 0.76
Chmp4bQ9D8B3 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp4bQ9D8B3 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp4bQ9D8B3 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp4bQ9D8B3 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp4bQ9D8B3 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp4bQ9D8B3 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Chmp4bQ9D8B3 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC19.77■□□□□ 0.76
Chmp4bQ9D8B3 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.77■□□□□ 0.76
Chmp4bQ9D8B3 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp4bQ9D8B3 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp4bQ9D8B3 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Chmp4bQ9D8B3 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp4bQ9D8B3 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms