Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lysmd3Q99LE3 Gm27646-201ENSMUST00000183989 110 ntBASIC16.32■□□□□ 0.2
Lysmd3Q99LE3 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.32■□□□□ 0.2
Lysmd3Q99LE3 AW822252-206ENSMUST00000208904 237 ntBASIC16.32■□□□□ 0.2
Lysmd3Q99LE3 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lysmd3Q99LE3 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lysmd3Q99LE3 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lysmd3Q99LE3 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lysmd3Q99LE3 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lysmd3Q99LE3 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lysmd3Q99LE3 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lysmd3Q99LE3 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lysmd3Q99LE3 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lysmd3Q99LE3 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lysmd3Q99LE3 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Lysmd3Q99LE3 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd3Q99LE3 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd3Q99LE3 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd3Q99LE3 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd3Q99LE3 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd3Q99LE3 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd3Q99LE3 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd3Q99LE3 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd3Q99LE3 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd3Q99LE3 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd3Q99LE3 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd3Q99LE3 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd3Q99LE3 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd3Q99LE3 Gm6443-201ENSMUST00000203599 874 ntBASIC16.31■□□□□ 0.2
Lysmd3Q99LE3 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.31■□□□□ 0.2
Lysmd3Q99LE3 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd3Q99LE3 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd3Q99LE3 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.31■□□□□ 0.2
Lysmd3Q99LE3 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd3Q99LE3 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd3Q99LE3 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd3Q99LE3 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd3Q99LE3 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Lysmd3Q99LE3 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd3Q99LE3 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd3Q99LE3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd3Q99LE3 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Lysmd3Q99LE3 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd3Q99LE3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd3Q99LE3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd3Q99LE3 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Lysmd3Q99LE3 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd3Q99LE3 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd3Q99LE3 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd3Q99LE3 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd3Q99LE3 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd3Q99LE3 Gm7222-201ENSMUST00000117512 906 ntBASIC16.3■□□□□ 0.2
Lysmd3Q99LE3 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd3Q99LE3 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.3■□□□□ 0.2
Lysmd3Q99LE3 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.3■□□□□ 0.2
Lysmd3Q99LE3 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd3Q99LE3 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.3■□□□□ 0.2
Lysmd3Q99LE3 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd3Q99LE3 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
Lysmd3Q99LE3 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.3■□□□□ 0.2
Lysmd3Q99LE3 AV026068-213ENSMUST00000223675 1171 ntBASIC16.3■□□□□ 0.2
Lysmd3Q99LE3 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Lysmd3Q99LE3 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd3Q99LE3 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd3Q99LE3 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd3Q99LE3 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.3■□□□□ 0.2
Lysmd3Q99LE3 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd3Q99LE3 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Lysmd3Q99LE3 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd3Q99LE3 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd3Q99LE3 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd3Q99LE3 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd3Q99LE3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Lysmd3Q99LE3 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd3Q99LE3 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Lysmd3Q99LE3 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd3Q99LE3 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd3Q99LE3 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Lysmd3Q99LE3 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd3Q99LE3 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd3Q99LE3 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd3Q99LE3 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.29■□□□□ 0.2
Lysmd3Q99LE3 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Lysmd3Q99LE3 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd3Q99LE3 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd3Q99LE3 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd3Q99LE3 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd3Q99LE3 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd3Q99LE3 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd3Q99LE3 Gm8344-201ENSMUST00000119813 856 ntBASIC16.29■□□□□ 0.2
Lysmd3Q99LE3 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.29■□□□□ 0.2
Lysmd3Q99LE3 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd3Q99LE3 Gm43514-201ENSMUST00000198852 424 ntBASIC16.29■□□□□ 0.2
Lysmd3Q99LE3 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd3Q99LE3 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd3Q99LE3 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.29■□□□□ 0.2
Lysmd3Q99LE3 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd3Q99LE3 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd3Q99LE3 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd3Q99LE3 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms