Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC19.3■□□□□ 0.68
Tmc1Q8R4P5 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tmc1Q8R4P5 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tmc1Q8R4P5 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tmc1Q8R4P5 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC19.3■□□□□ 0.68
Tmc1Q8R4P5 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tmc1Q8R4P5 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tmc1Q8R4P5 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tmc1Q8R4P5 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Tmc1Q8R4P5 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Tmc1Q8R4P5 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tmc1Q8R4P5 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tmc1Q8R4P5 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tmc1Q8R4P5 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Tmc1Q8R4P5 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tmc1Q8R4P5 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tmc1Q8R4P5 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.29■□□□□ 0.68
Tmc1Q8R4P5 Gm9013-201ENSMUST00000132939 882 ntBASIC19.29■□□□□ 0.68
Tmc1Q8R4P5 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.29■□□□□ 0.68
Tmc1Q8R4P5 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.29■□□□□ 0.68
Tmc1Q8R4P5 Gm7213-201ENSMUST00000215977 950 ntBASIC19.29■□□□□ 0.68
Tmc1Q8R4P5 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.29■□□□□ 0.68
Tmc1Q8R4P5 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tmc1Q8R4P5 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tmc1Q8R4P5 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tmc1Q8R4P5 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tmc1Q8R4P5 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC19.29■□□□□ 0.68
Tmc1Q8R4P5 Gm43352-201ENSMUST00000196419 3065 ntBASIC19.29■□□□□ 0.68
Tmc1Q8R4P5 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tmc1Q8R4P5 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tmc1Q8R4P5 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tmc1Q8R4P5 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tmc1Q8R4P5 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tmc1Q8R4P5 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
Tmc1Q8R4P5 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tmc1Q8R4P5 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Tmc1Q8R4P5 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tmc1Q8R4P5 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tmc1Q8R4P5 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tmc1Q8R4P5 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tmc1Q8R4P5 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.28■□□□□ 0.68
Tmc1Q8R4P5 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tmc1Q8R4P5 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tmc1Q8R4P5 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tmc1Q8R4P5 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tmc1Q8R4P5 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tmc1Q8R4P5 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tmc1Q8R4P5 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tmc1Q8R4P5 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tmc1Q8R4P5 Gm9103-201ENSMUST00000119371 405 ntBASIC19.28■□□□□ 0.68
Tmc1Q8R4P5 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.28■□□□□ 0.68
Tmc1Q8R4P5 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tmc1Q8R4P5 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tmc1Q8R4P5 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tmc1Q8R4P5 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tmc1Q8R4P5 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tmc1Q8R4P5 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tmc1Q8R4P5 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Tmc1Q8R4P5 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tmc1Q8R4P5 Gm9768-201ENSMUST00000206007 2861 ntBASIC19.28■□□□□ 0.68
Tmc1Q8R4P5 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tmc1Q8R4P5 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Tmc1Q8R4P5 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tmc1Q8R4P5 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tmc1Q8R4P5 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tmc1Q8R4P5 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tmc1Q8R4P5 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tmc1Q8R4P5 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tmc1Q8R4P5 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tmc1Q8R4P5 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Tmc1Q8R4P5 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Tmc1Q8R4P5 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tmc1Q8R4P5 Gm37728-201ENSMUST00000195025 2292 ntBASIC19.27■□□□□ 0.68
Tmc1Q8R4P5 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tmc1Q8R4P5 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Tmc1Q8R4P5 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Tmc1Q8R4P5 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tmc1Q8R4P5 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tmc1Q8R4P5 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tmc1Q8R4P5 Gm7284-201ENSMUST00000131667 944 ntBASIC19.27■□□□□ 0.68
Tmc1Q8R4P5 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tmc1Q8R4P5 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tmc1Q8R4P5 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tmc1Q8R4P5 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Tmc1Q8R4P5 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Tmc1Q8R4P5 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Tmc1Q8R4P5 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tmc1Q8R4P5 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Tmc1Q8R4P5 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tmc1Q8R4P5 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tmc1Q8R4P5 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Tmc1Q8R4P5 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Tmc1Q8R4P5 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tmc1Q8R4P5 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tmc1Q8R4P5 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Tmc1Q8R4P5 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tmc1Q8R4P5 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Tmc1Q8R4P5 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tmc1Q8R4P5 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tmc1Q8R4P5 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms