Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn1Q8K0T0 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rtn1Q8K0T0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rtn1Q8K0T0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn1Q8K0T0 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Rtn1Q8K0T0 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn1Q8K0T0 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn1Q8K0T0 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn1Q8K0T0 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn1Q8K0T0 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn1Q8K0T0 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Rtn1Q8K0T0 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn1Q8K0T0 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn1Q8K0T0 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn1Q8K0T0 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn1Q8K0T0 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.16■□□□□ 0.5
Rtn1Q8K0T0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Rtn1Q8K0T0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.16■□□□□ 0.5
Rtn1Q8K0T0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn1Q8K0T0 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn1Q8K0T0 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn1Q8K0T0 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn1Q8K0T0 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn1Q8K0T0 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn1Q8K0T0 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn1Q8K0T0 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn1Q8K0T0 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn1Q8K0T0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn1Q8K0T0 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Rtn1Q8K0T0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn1Q8K0T0 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Rtn1Q8K0T0 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn1Q8K0T0 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn1Q8K0T0 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.15■□□□□ 0.5
Rtn1Q8K0T0 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.15■□□□□ 0.5
Rtn1Q8K0T0 Gm8655-201ENSMUST00000221159 852 ntBASIC18.15■□□□□ 0.5
Rtn1Q8K0T0 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn1Q8K0T0 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn1Q8K0T0 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn1Q8K0T0 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn1Q8K0T0 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn1Q8K0T0 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn1Q8K0T0 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.15■□□□□ 0.5
Rtn1Q8K0T0 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn1Q8K0T0 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn1Q8K0T0 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn1Q8K0T0 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn1Q8K0T0 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Rtn1Q8K0T0 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn1Q8K0T0 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn1Q8K0T0 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rtn1Q8K0T0 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Rtn1Q8K0T0 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn1Q8K0T0 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn1Q8K0T0 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.14■□□□□ 0.49
Rtn1Q8K0T0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.14■□□□□ 0.49
Rtn1Q8K0T0 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC18.14■□□□□ 0.49
Rtn1Q8K0T0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.14■□□□□ 0.49
Rtn1Q8K0T0 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.14■□□□□ 0.49
Rtn1Q8K0T0 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn1Q8K0T0 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn1Q8K0T0 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn1Q8K0T0 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn1Q8K0T0 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.14■□□□□ 0.49
Rtn1Q8K0T0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.14■□□□□ 0.49
Rtn1Q8K0T0 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn1Q8K0T0 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.14■□□□□ 0.49
Rtn1Q8K0T0 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn1Q8K0T0 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn1Q8K0T0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.13■□□□□ 0.49
Rtn1Q8K0T0 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn1Q8K0T0 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Rtn1Q8K0T0 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn1Q8K0T0 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn1Q8K0T0 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn1Q8K0T0 AC133083.1-201ENSMUST00000221736 2209 ntBASIC18.13■□□□□ 0.49
Rtn1Q8K0T0 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn1Q8K0T0 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Rtn1Q8K0T0 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn1Q8K0T0 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
Rtn1Q8K0T0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.13■□□□□ 0.49
Rtn1Q8K0T0 Gm44357-201ENSMUST00000195897 142 ntBASIC18.13■□□□□ 0.49
Rtn1Q8K0T0 Gm19658-201ENSMUST00000196231 138 ntBASIC18.13■□□□□ 0.49
Rtn1Q8K0T0 Gm44367-201ENSMUST00000196836 138 ntBASIC18.13■□□□□ 0.49
Rtn1Q8K0T0 Gm44350-201ENSMUST00000197197 138 ntBASIC18.13■□□□□ 0.49
Rtn1Q8K0T0 Gm44390-201ENSMUST00000197533 144 ntBASIC18.13■□□□□ 0.49
Rtn1Q8K0T0 Gm44313-201ENSMUST00000198018 138 ntBASIC18.13■□□□□ 0.49
Rtn1Q8K0T0 Gm44486-201ENSMUST00000198508 138 ntBASIC18.13■□□□□ 0.49
Rtn1Q8K0T0 Gm44314-201ENSMUST00000199263 138 ntBASIC18.13■□□□□ 0.49
Rtn1Q8K0T0 Gm44394-201ENSMUST00000199558 138 ntBASIC18.13■□□□□ 0.49
Rtn1Q8K0T0 Gm44484-201ENSMUST00000199873 138 ntBASIC18.13■□□□□ 0.49
Rtn1Q8K0T0 Gm44466-201ENSMUST00000200264 138 ntBASIC18.13■□□□□ 0.49
Rtn1Q8K0T0 Gm44359-201ENSMUST00000200671 138 ntBASIC18.13■□□□□ 0.49
Rtn1Q8K0T0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.13■□□□□ 0.49
Rtn1Q8K0T0 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn1Q8K0T0 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn1Q8K0T0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Rtn1Q8K0T0 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rtn1Q8K0T0 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rtn1Q8K0T0 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms